Gene Lcho_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3418 
Symbol 
ID6162071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3803139 
End bp3803726 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content74% 
IMG OID641666193 
Productgeneral secretion pathway protein C 
Protein accessionYP_001792441 
Protein GI171060092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000246918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCTGGG CCGCACTCGC GGCCAGCCTC GTTTTCTGGG TTTTGCGTCT GGGCGCACGA 
CCCGAACCGT TGCCTGCGCG GGTGCAGACC GTCGCTTCCG ACCAGTCCAC CCGTGGCGAG 
ATCTTGCGTT TGTTTGCAAA TCCGGTGGCC GCCGGCGCCA CGCCCGCGAT GCAGGCCACG 
GCATCGAGCC GCATGCGCCT GCTCGGGGTG GTCGCCGGTG CCGATGACGA CGCGCGCGGC 
TGGGTGGTGC TGAGCATCGA CGGCCAGCCG GCCCGCACGA TCCAGGTCGG CGCTCAGGTC 
GACGGCGACT GGGTGGTGCA GACCGTGACG AACCGGCGCG TCGAGATCGG GCCGTCCGGC 
GCACCGGCCG TCGCGGTGCT CGAACTGCCG TTGCCGGCGC CTGCCGCGAC CGGTCAGCTG 
CCGACGGCGA TGCCCCTGGC CGTGGGTGCC ACCGCGGTGC TGACGCCACC TGCGCGGGCG 
CTGCCGGAAA ACATGCCGCC CCCGCCACCG CCCGCGATGG CCGAGCGGCC GGGCACGCAA 
GGGCTGCCGG CTGAGCCGTC CCCGGCGCCG GTCGACGTGG CGCGCTGA
 
Protein sequence
MVWAALAASL VFWVLRLGAR PEPLPARVQT VASDQSTRGE ILRLFANPVA AGATPAMQAT 
ASSRMRLLGV VAGADDDARG WVVLSIDGQP ARTIQVGAQV DGDWVVQTVT NRRVEIGPSG 
APAVAVLELP LPAPAATGQL PTAMPLAVGA TAVLTPPARA LPENMPPPPP PAMAERPGTQ 
GLPAEPSPAP VDVAR