8 homologs were found in PanDaTox collection
for query gene Lcho_0960 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_0960  hypothetical protein  100 
 
 		 192 aa  380  1e-105  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007908  Rfer_3193  hypothetical protein  49.11 
 
 		 193 aa  166  2e-40  Rhodoferax ferrireducens T118  Bacteria  normal  0.101403  n/a   
 
 
-
 
NC_012791  Vapar_1619  hypothetical protein  44.44 
 
 		 196 aa  151  5e-36  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2239  hypothetical protein  35.58 
 
 		 227 aa  108  4.0000000000000004e-23  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1794  hypothetical protein  29.21 
 
 		 191 aa  75.9  0.0000000000003  Polaromonas sp. JS666  Bacteria  normal  1  hitchhiker  0.0000383303 
 
 
-
 
NC_008781  Pnap_2791  hypothetical protein  25.71 
 
 		 190 aa  59.7  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  hitchhiker  0.00120984 
 
 
-
 
NC_011891  A2cp1_0085  hypothetical protein  28.12 
 
 		 201 aa  42.7  0.003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0635336  n/a   
 
 
-
 
NC_011145  AnaeK_0073  hypothetical protein  27.34 
 
 		 201 aa  41.2  0.009  Anaeromyxobacter sp. K  Bacteria  normal  0.260835  n/a   
 
 
-
 
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