Gene Lcho_0960 details

Gene Information

• Locus tag: Lcho_0960
• ID: 6160505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1025692
• End bp: 1026270
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 641663711
• Product: hypothetical protein
• Protein accession: YP_001789997
• Protein GI: 171057648

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 85
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTGATGC GTACGCGCGC CCTGCTGGCC GCCCCGTTGC TGGTTCTGAG TCTGGCCACG 
GCCCATGCGG CCGATTCGCC GGCGGCCAAG AAAGCCCTGG TCCAGAAGGT TCTGCAGATG 
CAGCAACCGG GCATCGACGG CATCGCCCGC ACCCTGGCCG AACAGCCGGT GGCGCCGATG 
ATGCAGCAGG TCGCCGGCCT GCTGCGCACC CGGGTGCCCG AGGACAAGCG CGAGGCGCTG 
TCCAAGGAAA TCCAGGGCGA CTTCAAGAAG TACATCGACG CCACCGTGCC GCTGCTGCGT 
GACCGCGCCA AGGCGCTGGC GCCGACCACC ATCGGTGCCG TGCTCGAGCA GAAGTTCAGC 
GAAGACGAGC TCAAGCAGCT GGTGACCTGG CTCGAGTCGC CGCTGGCGCG CAAGTACCAG 
ACCGCGTTCC CCGAGTTCCA GCGCTCGCTG ACCGAGAAGC TCGTGGCCGA GACCCGTCCG 
ATGGTCGAGC CCAACCTGCG CGAGCTCAAC GAATCCATCA CCCGGCGCCT GGCGGCCCAT 
GCGGGTGCGC CCGCTGCTGC CGGCGCGTCC AAACCCTGA 

 

Protein sequence

MLMRTRALLA APLLVLSLAT AHAADSPAAK KALVQKVLQM QQPGIDGIAR TLAEQPVAPM 
MQQVAGLLRT RVPEDKREAL SKEIQGDFKK YIDATVPLLR DRAKALAPTT IGAVLEQKFS 
EDELKQLVTW LESPLARKYQ TAFPEFQRSL TEKLVAETRP MVEPNLRELN ESITRRLAAH 
AGAPAAAGAS KP