17 homologs were found in PanDaTox collection
for query gene Lcho_0056 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_0056  hypothetical protein  100 
 
 		 154 aa  296  5e-80  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.938573 
 
 
-
 
NC_010511  M446_2904  hypothetical protein  54.55 
 
 		 320 aa  58.9  0.00000002  Methylobacterium sp. 4-46  Bacteria  normal  0.0853596  normal  1 
 
 
-
 
NC_009475  BBta_p0039  putative ABC-type uncharacterized transport system, periplasmic component  57.78 
 
 		 327 aa  57.4  0.00000007  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_2818  putative ABC-type uncharacterized transport system, periplasmic component  51.11 
 
 		 326 aa  55.5  0.0000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2884  hypothetical protein  47.27 
 
 		 365 aa  53.5  0.000001  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_1481  hypothetical protein  49.12 
 
 		 336 aa  53.1  0.000001  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010373  M446_7008  hypothetical protein  60 
 
 		 328 aa  52.4  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6911  hypothetical protein  49.09 
 
 		 329 aa  52.8  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_3978  hypothetical protein  50.94 
 
 		 328 aa  49.3  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  0.890464  normal  1 
 
 
-
 
NC_010511  M446_6721  hypothetical protein  51.11 
 
 		 324 aa  48.9  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_5660  hypothetical protein  46.67 
 
 		 325 aa  49.3  0.00002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.857486  normal  1 
 
 
-
 
NC_010511  M446_1048  hypothetical protein  55.56 
 
 		 344 aa  48.1  0.00005  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_5656  hypothetical protein  31.9 
 
 		 328 aa  46.6  0.0001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_4781  protein of unknown function DUF534  48.89 
 
 		 334 aa  46.6  0.0001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_5292  hypothetical protein  45.45 
 
 		 327 aa  42.7  0.002  Methylobacterium sp. 4-46  Bacteria  normal  0.562532  normal  0.378234 
 
 
-
 
NC_010511  M446_1052  hypothetical protein  48.89 
 
 		 354 aa  40.8  0.006  Methylobacterium sp. 4-46  Bacteria  normal  0.0655813  normal  1 
 
 
-
 
NC_011894  Mnod_2388  protein of unknown function DUF534  51.11 
 
 		 326 aa  40.4  0.01  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.382961  n/a   
 
 
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