7 homologs were found in PanDaTox collection
for query gene HMPREF0424_1363 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_1363  tRNA-Ser  100 
 
 		 90 bp  178  1e-43  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_010816  BLD_t0049  tRNA-Ser  95.45 
 
 		 90 bp  143  8e-33  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_R0006  tRNA-Ser  94.29 
 
 		 90 bp  54  0.000006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286369  normal  0.0478712 
 
 
-
 
NC_009524  PsycPRwf_R0032  tRNA-Ser  96.43 
 
 		 91 bp  48.1  0.0004  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.0000000000241794  hitchhiker  0.000000080319 
 
 
-
 
NC_009524  PsycPRwf_R0033  tRNA-Ser  96.43 
 
 		 91 bp  48.1  0.0004  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00000000323834  hitchhiker  0.00000000664377 
 
 
-
 
NC_008528  OEOE_t0530  tRNA-Ser  91.18 
 
 		 88 bp  44.1  0.006  Oenococcus oeni PSU-1  Bacteria  normal  0.159007  n/a   
 
 
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NC_011374  UUR10_0693  tRNA-Ser  100 
 
 		 91 bp  44.1  0.006  Ureaplasma urealyticum serovar 10 str. ATCC 33699  Bacteria  normal  0.474053  n/a   
 
 
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