6 homologs were found in PanDaTox collection
for query gene HMPREF0424_0780 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_0780  tetratricopeptide repeat protein  100 
 
 		 1150 aa  2390    Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.516639 
 
 
-
 
NC_010816  BLD_0065  hypothetical protein  42.98 
 
 		 1184 aa  561  1e-158  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_0594  Tetratricopeptide domain protein  25.85 
 
 		 896 aa  93.6  2e-17  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.289382 
 
 
-
 
NC_013203  Apar_0887  hypothetical protein  22.95 
 
 		 755 aa  86.3  0.000000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.069318 
 
 
-
 
NC_013203  Apar_0947  Tetratricopeptide domain protein  24.59 
 
 		 694 aa  79  0.0000000000005  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_10530  hypothetical protein  22.57 
 
 		 903 aa  63.2  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0318829  hitchhiker  0.0000000474744 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>