| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0947 |
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| Symbol | |
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| ID | 8413818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1066327 |
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| End bp | 1068411 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022535 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003179967 |
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| Protein GI | 257784750 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCGTCT CAGATCTTTT CTCGCTAAAT AAAGCTTCAA AGCAATCTCA GGGATCTACC
CTAGAGAAGA TTTTGCTGCG CTCAAATAAT GTCATTGCCT CTCTTAAAGA CCTTGTTGCA
AACAATCAGA TTACAGAGAC GGGTCTTCAA GAGATGTTGA TGCGCTCTAA AAATCTCGAG
AATACCAATC TGCCTAAGGG CGATGTTCAT AAACTTGATA GAACGGGTCG CTGGTGGTTT
AATGCCAACA CACTGGAATG TGCGGCTGAA GAGTACGATG CTTTTATTGC AACTGAAGCA
ATCCTCAATA TTTCACAAGA TGTTGAGGCT CTAAAAAATA CTCACGCTTC TGAAACGGAT
CTCCAGCTTG TTCGTACTAC ACTCTCGCAG GTAGCAAGTA TCATGCCCAA GTCATCCTCC
CTTACTGAGC AAGTTGCTCC TTTTAGTGGT GGTGCAGACG GCAGCTCTGA CTGGATGAAA
CGTCTCTGGT TTGCCAACTA TGTTGAGAAC ACACCATTTC CCTTTAGGAT GGTGTATAAC
TTCTCTTACA ACCCCCAGCT TGATATTTTG GTATTTGAAT TCTTTGTAGC TCGCCCTCGC
TGCTTTAGTT TCTTATCTGC AGAAAAGTCA GAGCAAATTG CAGCAGCACG TGCTTATGCG
CTGCGAACTT CTCTTTGCGT TGCTCGTATG GCGCTTCAAA GCTGTAAAAT CTCTCGTGTC
TGCATCAATG GCAGCCTACG CGGAGAAGAC CGTATTGTCA TATCGATGGA CTTAAACGAG
GCTGCACTTG CTCGCCTCTT ACCTACTGCA GCAAATACTC AAATTGACAG TAACAGCTTT
CCACAAGATC CTGCGCTTAG AGTTTCTTTT GACACTGAAG GTTGGTTCAA CGAGGTTGAA
CCCTTCATGA AGCCAACTGA TGAGTGGGTT TCTCCTCGTA GCTTCTTTGA GGTACCAGAC
TTGTCTGATC GTCCTTGTTC GGCGGCGGTT ACCGCTATTT GTGGAGCTCA AAAGGTAAAT
GATCTTGGGT ACTCTGAAGC AGCTCATCGC ATTAAGCTTT GGAATACCAC CCTCAACAAC
ATCCCAAAAG ATGCTTCAAC TGCAGATGTA GTTAGCCAGC TTGAGGAAGC AAAAGCTTCA
ACTTCTGATA TTTATGCCAT TGAAGGTCTT GATAGAGTCA TTCACGGCCT GGTTGAAGGG
ACTATTGATT TTTCAGATAG AAGAACCATG GCCGAGAAAT TCCTCTTTGG CTCGCCTCTC
AACAAAACAC TTGAGACCAT AAAGAACATC ATGGATGGAG AGCCAGATCC AGATGCTCTA
GAAAAAACAC TCACAGAGCT TGAATCGCAG GTTTCACCAA CCCTTGATAT GGGCTTATAC
CTGGACGATT CGGATTCTAT CTACAGATAT TTTGATTCCA TCTCAGAGCG CATAGCCTAT
AACCTTGCGT TCCCCAATGA GCCAAGAAAA CTTGTACTTA TTCCAGATAC GTACTTCATG
TCTTTGGCAA GAATGGCACG CGCCTATAAC CTGCTTGAGC AGTCAGAAAA AGCAGAACGC
TACGCGCAAG AAGCCCACAG GATTTCTCCT TTGGGAATTG ATGCAACATT GTTGCTAGTA
AGAACACTGG AAGATCAGTC AAAAATTTTT GAGGCTGCAA AGCTTCTCAA AAATCTTATC
CAACATCTTT TCTCCAGTTC AGATGTTGCA CTGGTGTACT ATCGCCTGGC ATATATGGAG
TGGAAACTGG GACGCTCTGA TCTTTGCGCA GCTTGCTATC AAATGGCCAT AATTATCGGT
GGTAATGTTG CTCAGCCTGC AAAAGAAGAG CTTAAAGACC TTCTAAAGAC AGATTCTTCT
GTCAAAACGC TAGACACCCC TCAAGAGGTC TTCTCGTTCC TTGAGCAAAA TAATATTCCT
GTCTTTGACC AGAAAGCTGT ATTTAACAAG GCAGTTACTA TTGCCAGTGC CTGTGTTAAC
GATGGCGTTT ATTGTGTTGG TCAGAATATG CTCAAGAACT GCCTTGAGAT TACGTTTGAT
GATGCAGCTG CAAAAGTTGA GAGTTCACTG AGATCACCCT ACTAA
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| Protein sequence | MGVSDLFSLN KASKQSQGST LEKILLRSNN VIASLKDLVA NNQITETGLQ EMLMRSKNLE
NTNLPKGDVH KLDRTGRWWF NANTLECAAE EYDAFIATEA ILNISQDVEA LKNTHASETD
LQLVRTTLSQ VASIMPKSSS LTEQVAPFSG GADGSSDWMK RLWFANYVEN TPFPFRMVYN
FSYNPQLDIL VFEFFVARPR CFSFLSAEKS EQIAAARAYA LRTSLCVARM ALQSCKISRV
CINGSLRGED RIVISMDLNE AALARLLPTA ANTQIDSNSF PQDPALRVSF DTEGWFNEVE
PFMKPTDEWV SPRSFFEVPD LSDRPCSAAV TAICGAQKVN DLGYSEAAHR IKLWNTTLNN
IPKDASTADV VSQLEEAKAS TSDIYAIEGL DRVIHGLVEG TIDFSDRRTM AEKFLFGSPL
NKTLETIKNI MDGEPDPDAL EKTLTELESQ VSPTLDMGLY LDDSDSIYRY FDSISERIAY
NLAFPNEPRK LVLIPDTYFM SLARMARAYN LLEQSEKAER YAQEAHRISP LGIDATLLLV
RTLEDQSKIF EAAKLLKNLI QHLFSSSDVA LVYYRLAYME WKLGRSDLCA ACYQMAIIIG
GNVAQPAKEE LKDLLKTDSS VKTLDTPQEV FSFLEQNNIP VFDQKAVFNK AVTIASACVN
DGVYCVGQNM LKNCLEITFD DAAAKVESSL RSPY
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