10 homologs were found in PanDaTox collection
for query gene Gdia_3213 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_3213  hypothetical protein  100 
 
 
385 aa  762    Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.20383  normal 
 
 
-
 
NC_009430  Rsph17025_4051  hypothetical protein  33.88 
 
 
418 aa  55.5  0.000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.749152  normal  0.1289 
 
 
-
 
NC_009380  Strop_1948  hypothetical protein  29.13 
 
 
669 aa  53.9  0.000005  Salinispora tropica CNB-440  Bacteria  normal  0.247552  normal  0.114071 
 
 
-
 
NC_011757  Mchl_1965  hypothetical protein  31.01 
 
 
486 aa  50.8  0.00004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3027  signal peptide protein  37.37 
 
 
282 aa  48.9  0.0002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0193368  normal  0.0163712 
 
 
-
 
NC_010682  Rpic_3307  putative signal peptide protein  34.51 
 
 
280 aa  46.6  0.0007  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0281892 
 
 
-
 
NC_012856  Rpic12D_2960  signal peptide protein  34.51 
 
 
280 aa  46.2  0.001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0142734 
 
 
-
 
NC_009483  Gura_0383  peptidase S8/S53 subtilisin kexin sedolisin  33.33 
 
 
1726 aa  45.4  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1435  putative virulence effector protein  26.39 
 
 
402 aa  45.1  0.002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0896  hypothetical protein  31.73 
 
 
421 aa  43.1  0.009  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.08458  normal  0.380175 
 
 
-
 
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