Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3307 |
Symbol | |
ID | 6288448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3445435 |
End bp | 3446277 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642626883 |
Product | putative signal peptide protein |
Protein accession | YP_001900861 |
Protein GI | 187930374 |
COG category | [S] Function unknown |
COG ID | [COG4676] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0281892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTT CCACTTTCCG TCTCGCCGCT GCCATCGCGC TGGCCGCGTT TGCGGCCGCT GGGAGCGTGC TTGCGCAAAC CGACGCCGGC AATATCGAGA TGACTGCGCC GCTCAATGGC TGGCGCAATT CGGCGGGCGA TGAATCCCGC TACACGCAGG ACGTGCATTA CCCGGCCGTA TCGGTGTCGA CGCCCCAAGG GCAGGGTGTG GCGTCGATGA TCGCCGGGCG CATCCGCAAC CAGCCGAAGG CTGCTGCAGC AATGGACGAA AGCAAGCCGC GCCGCCGCCG TGGCGCCGAC GGCTCGTCGG TGGGCACGCT GATCGTCAAT GGCGTGGCCA TGCCGCAGCG CATCGAGGCC GACGGTACGT TCTCGCGCCC GTATGCATTT GGCGCCGGCA GCAACAGCGT GGAGGTGCGC AGCGCGCGCG GCGACGCCAA GCGTGTGCAG TTCTACGACA GCTACGCCGG CAAGCAGCGT CCGCGTTTGC GCGTGGTCCT GTCGTGGGAC ACCGATGGCA CCGATCTCGA CTTGCACGTC ATTTCGCCCG ATGGCCAGCA TGCCTGGTAC GGCAACCGCG TGGTCGAAAA CGGTGGGGCG CTCGACGTGG ACGTCACCAC CGGGTATGGT CCCGAGATCT ATTCGAATCC GGCGCCCGTG CCTGGCACGT ATCTCGTCTA CGTGAACTAC TACGGCAGCG GCAATGACAG CAGTGCGATC ACCACCGCCA CCGTCAGCAT CATCACCGAC GAGAACACGC CGTCCGAGCG CCAGCAGACG TTTGTCGTGC CGATGCGCAA GGCCGGCGAT CTGACGCTGT TACGCAGTTT CACGATGAAA TAG
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Protein sequence | MMPSTFRLAA AIALAAFAAA GSVLAQTDAG NIEMTAPLNG WRNSAGDESR YTQDVHYPAV SVSTPQGQGV ASMIAGRIRN QPKAAAAMDE SKPRRRRGAD GSSVGTLIVN GVAMPQRIEA DGTFSRPYAF GAGSNSVEVR SARGDAKRVQ FYDSYAGKQR PRLRVVLSWD TDGTDLDLHV ISPDGQHAWY GNRVVENGGA LDVDVTTGYG PEIYSNPAPV PGTYLVYVNY YGSGNDSSAI TTATVSIITD ENTPSERQQT FVVPMRKAGD LTLLRSFTMK
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