Gene Rpic_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3307 
Symbol 
ID6288448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3445435 
End bp3446277 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID642626883 
Productputative signal peptide protein 
Protein accessionYP_001900861 
Protein GI187930374 
COG category[S] Function unknown 
COG ID[COG4676] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0281892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTT CCACTTTCCG TCTCGCCGCT GCCATCGCGC TGGCCGCGTT TGCGGCCGCT 
GGGAGCGTGC TTGCGCAAAC CGACGCCGGC AATATCGAGA TGACTGCGCC GCTCAATGGC
TGGCGCAATT CGGCGGGCGA TGAATCCCGC TACACGCAGG ACGTGCATTA CCCGGCCGTA
TCGGTGTCGA CGCCCCAAGG GCAGGGTGTG GCGTCGATGA TCGCCGGGCG CATCCGCAAC
CAGCCGAAGG CTGCTGCAGC AATGGACGAA AGCAAGCCGC GCCGCCGCCG TGGCGCCGAC
GGCTCGTCGG TGGGCACGCT GATCGTCAAT GGCGTGGCCA TGCCGCAGCG CATCGAGGCC
GACGGTACGT TCTCGCGCCC GTATGCATTT GGCGCCGGCA GCAACAGCGT GGAGGTGCGC
AGCGCGCGCG GCGACGCCAA GCGTGTGCAG TTCTACGACA GCTACGCCGG CAAGCAGCGT
CCGCGTTTGC GCGTGGTCCT GTCGTGGGAC ACCGATGGCA CCGATCTCGA CTTGCACGTC
ATTTCGCCCG ATGGCCAGCA TGCCTGGTAC GGCAACCGCG TGGTCGAAAA CGGTGGGGCG
CTCGACGTGG ACGTCACCAC CGGGTATGGT CCCGAGATCT ATTCGAATCC GGCGCCCGTG
CCTGGCACGT ATCTCGTCTA CGTGAACTAC TACGGCAGCG GCAATGACAG CAGTGCGATC
ACCACCGCCA CCGTCAGCAT CATCACCGAC GAGAACACGC CGTCCGAGCG CCAGCAGACG
TTTGTCGTGC CGATGCGCAA GGCCGGCGAT CTGACGCTGT TACGCAGTTT CACGATGAAA
TAG
 
Protein sequence
MMPSTFRLAA AIALAAFAAA GSVLAQTDAG NIEMTAPLNG WRNSAGDESR YTQDVHYPAV 
SVSTPQGQGV ASMIAGRIRN QPKAAAAMDE SKPRRRRGAD GSSVGTLIVN GVAMPQRIEA
DGTFSRPYAF GAGSNSVEVR SARGDAKRVQ FYDSYAGKQR PRLRVVLSWD TDGTDLDLHV
ISPDGQHAWY GNRVVENGGA LDVDVTTGYG PEIYSNPAPV PGTYLVYVNY YGSGNDSSAI
TTATVSIITD ENTPSERQQT FVVPMRKAGD LTLLRSFTMK