12 homologs were found in PanDaTox collection
for query gene Gbem_2987 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2987  hypothetical protein  100 
 
 
193 aa  404  1.0000000000000001e-112  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000055381  n/a   
 
 
-
 
NC_008781  Pnap_2655  hypothetical protein  35.8 
 
 
212 aa  112  3e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1356  hypothetical protein  32.73 
 
 
201 aa  93.6  2e-18  Rhodoferax ferrireducens T118  Bacteria  normal  0.0235226  n/a   
 
 
-
 
NC_007404  Tbd_2001  hypothetical protein  31.72 
 
 
210 aa  90.9  1e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2679  hypothetical protein  29.22 
 
 
190 aa  82.4  0.000000000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_16910  hypothetical protein  35.1 
 
 
169 aa  82  0.000000000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8746  hypothetical protein  30.96 
 
 
210 aa  70.9  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4092  hypothetical protein  29.81 
 
 
203 aa  56.2  0.0000003  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011893  Mnod_8816  hypothetical protein  29.84 
 
 
205 aa  53.9  0.000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2372  hypothetical protein  28.23 
 
 
202 aa  52  0.000005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3386  hypothetical protein  35.79 
 
 
315 aa  43.9  0.001  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0391  hypothetical protein  38.57 
 
 
200 aa  42.4  0.004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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