9 homologs were found in PanDaTox collection
for query gene Gbem_2246 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2246  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
131 aa  271  3e-72  Geobacter bemidjiensis Bem  Bacteria  normal  0.271466  n/a   
 
 
-
 
NC_012918  GM21_1980  pyridoxamine 5'-phosphate oxidase-related FMN-binding  93.13 
 
 
131 aa  253  4e-67  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_1955  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  51.15 
 
 
131 aa  154  4e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1909  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  47.69 
 
 
130 aa  134  4e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0010784  hitchhiker  0.000000497169 
 
 
-
 
NC_010085  Nmar_0576  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.87 
 
 
148 aa  48.1  0.00004  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007355  Mbar_A3004  hypothetical protein  27.64 
 
 
134 aa  43.9  0.0008  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.146588  hitchhiker  0.00337909 
 
 
-
 
NC_009135  MmarC5_0981  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.15 
 
 
133 aa  42.7  0.002  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1647  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.98 
 
 
133 aa  42.7  0.002  Methanococcus maripaludis C7  Archaea  normal  0.215557  normal  0.955035 
 
 
-
 
NC_008942  Mlab_1261  hypothetical protein  25.84 
 
 
133 aa  41.6  0.004  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
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