Gene Nmar_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0576 
Symbol 
ID5773522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp511861 
End bp512307 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content33% 
IMG OID641316210 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001581910 
Protein GI161528084 
COG category[R] General function prediction only 
COG ID[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGAAA TTACTGAAGA AATCAAGAAC TTTTTGAATC TACAAAAATT AGGTTATGTT 
GCCACAGTAT CTTCCGATGG AATGCCAAAC ATTTCTCCTA AGGGAACCAT AATTGGATGG
TCAAAAAACC AATTAGCATT TGCAGACATT CGTTCTCCTG ACACCATGAA AAATTTGCAG
ACTAATCCTA ATGTCGAAAT TAATGTAATT GATCCTTTGT TACGCAAGGG ATTTTTATTC
AAAGGTTCAG CCAAAATCCT TGAAGATTCC ACTATTTATG ATGAAATCTT GAACTATTAT
CGTAATAATG GCATAAAGAG TCCAATCAAC TCAATTGTTC TAGTTGATGT GGCTGAAATT
TCAGAAGTAA CTTCCCCTCT ATATGATATG GGTATTGGTG AAGAGGAAAT TAAATCAAAA
TGGAAAAAGC ATTTTGATAG TTTATGA
 
Protein sequence
MFEITEEIKN FLNLQKLGYV ATVSSDGMPN ISPKGTIIGW SKNQLAFADI RSPDTMKNLQ 
TNPNVEINVI DPLLRKGFLF KGSAKILEDS TIYDEILNYY RNNGIKSPIN SIVLVDVAEI
SEVTSPLYDM GIGEEEIKSK WKKHFDSL