41 homologs were found in PanDaTox collection
for query gene Nmar_0576 on replicon NC_010085
Organism: Nitrosopumilus maritimus SCM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010085  Nmar_0576  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
148 aa  299  7.000000000000001e-81  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007949  Bpro_5176  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.33 
 
 
335 aa  88.2  3e-17  Polaromonas sp. JS666  Bacteria  normal  normal  0.472651 
 
 
-
 
NC_011892  Mnod_8436  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36 
 
 
156 aa  85.1  3e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3125  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.06 
 
 
156 aa  65.1  0.0000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013721  HMPREF0424_1008  pyridoxamine 5'-phosphate oxidase family protein  28 
 
 
134 aa  63.5  0.0000000009  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008553  Mthe_0783  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.29 
 
 
151 aa  61.2  0.000000005  Methanosaeta thermophila PT  Archaea  normal  0.409434  n/a   
 
 
-
 
NC_008531  LEUM_0920  pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein  32.99 
 
 
132 aa  60.1  0.00000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00810829  n/a   
 
 
-
 
NC_009051  Memar_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.84 
 
 
134 aa  58.2  0.00000004  Methanoculleus marisnigri JR1  Archaea  normal  0.109181  n/a   
 
 
-
 
NC_009051  Memar_0996  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25 
 
 
134 aa  55.5  0.0000003  Methanoculleus marisnigri JR1  Archaea  normal  0.0213212  n/a   
 
 
-
 
NC_009712  Mboo_1132  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.02 
 
 
134 aa  54.3  0.0000005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.492287  normal 
 
 
-
 
NC_004116  SAG0422  hypothetical protein  34.07 
 
 
129 aa  54.3  0.0000005  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1045  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.41 
 
 
134 aa  54.3  0.0000006  Methanosaeta thermophila PT  Archaea  normal  0.0950451  n/a   
 
 
-
 
NC_011832  Mpal_1577  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.02 
 
 
134 aa  54.3  0.0000006  Methanosphaerula palustris E1-9c  Archaea  normal  0.188247  normal 
 
 
-
 
NC_010816  BLD_0323  putative flavin-nucleotide-binding protein  28 
 
 
139 aa  52.4  0.000002  Bifidobacterium longum DJO10A  Bacteria  normal  0.493786  n/a   
 
 
-
 
NC_009637  MmarC7_1647  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.9 
 
 
133 aa  52.4  0.000002  Methanococcus maripaludis C7  Archaea  normal  0.215557  normal  0.955035 
 
 
-
 
NC_007925  RPC_2217  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.04 
 
 
210 aa  50.8  0.000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.529207  normal  0.605811 
 
 
-
 
NC_007517  Gmet_1909  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.27 
 
 
130 aa  50.4  0.000008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0010784  hitchhiker  0.000000497169 
 
 
-
 
NC_007355  Mbar_A3004  hypothetical protein  26.72 
 
 
134 aa  49.3  0.00002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.146588  hitchhiker  0.00337909 
 
 
-
 
NC_007644  Moth_1426  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.48 
 
 
133 aa  48.9  0.00003  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.0000000000000163802  normal  0.0247628 
 
 
-
 
NC_009135  MmarC5_0981  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.2 
 
 
133 aa  48.5  0.00003  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_011146  Gbem_2246  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.87 
 
 
131 aa  48.1  0.00004  Geobacter bemidjiensis Bem  Bacteria  normal  0.271466  n/a   
 
 
-
 
NC_009975  MmarC6_0267  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.36 
 
 
133 aa  48.1  0.00004  Methanococcus maripaludis C6  Archaea  normal  0.61348  n/a   
 
 
-
 
NC_012918  GM21_1980  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.87 
 
 
131 aa  47.8  0.00006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009635  Maeo_1125  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.12 
 
 
136 aa  47.4  0.00007  Methanococcus aeolicus Nankai-3  Archaea  normal  0.502995  n/a   
 
 
-
 
NC_007355  Mbar_A1522  hypothetical protein  25.19 
 
 
134 aa  46.6  0.0001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.249328  normal 
 
 
-
 
NC_011004  Rpal_1920  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.93 
 
 
206 aa  45.8  0.0002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.392455  n/a   
 
 
-
 
NC_009634  Mevan_1497  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.63 
 
 
133 aa  46.2  0.0002  Methanococcus vannielii SB  Archaea  normal  0.771911  n/a   
 
 
-
 
NC_009712  Mboo_0293  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.83 
 
 
132 aa  46.2  0.0002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009485  BBta_7101  hypothetical protein  32.35 
 
 
210 aa  45.8  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.634949  normal 
 
 
-
 
NC_007955  Mbur_1657  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.43 
 
 
134 aa  46.2  0.0002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013526  Tter_2143  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  27.54 
 
 
137 aa  45.1  0.0004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1699  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.98 
 
 
231 aa  44.3  0.0006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.343483 
 
 
-
 
NC_011666  Msil_2565  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.79 
 
 
207 aa  43.9  0.0007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.146359 
 
 
-
 
NC_007355  Mbar_A3577  hypothetical protein  24.19 
 
 
137 aa  43.5  0.0009  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.179326 
 
 
-
 
NC_007955  Mbur_0586  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.8 
 
 
134 aa  43.1  0.001  Methanococcoides burtonii DSM 6242  Archaea  normal  0.114456  n/a   
 
 
-
 
NC_013441  Gbro_3285  PPOX class putative F420-dependent enzyme  28.74 
 
 
130 aa  42.4  0.002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.696132  n/a   
 
 
-
 
NC_007298  Daro_1523  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.35 
 
 
205 aa  42.4  0.002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3650  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.65 
 
 
209 aa  42  0.003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.202894  normal 
 
 
-
 
NC_009051  Memar_0266  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.11 
 
 
163 aa  42  0.003  Methanoculleus marisnigri JR1  Archaea  normal  0.0674579  n/a   
 
 
-
 
NC_009483  Gura_1955  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.27 
 
 
131 aa  40.8  0.006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1056  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  24.64 
 
 
135 aa  40.8  0.007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.991641  n/a   
 
 
-
 
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