7 homologs were found in PanDaTox collection
for query gene Gbem_1404 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1404  hypothetical protein  100 
 
 
287 aa  581  1.0000000000000001e-165  Geobacter bemidjiensis Bem  Bacteria  normal  0.892545  n/a   
 
 
-
 
NC_012918  GM21_2879  hypothetical protein  86.36 
 
 
287 aa  483  1e-135  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000019953 
 
 
-
 
NC_008463  PA14_63660  hypothetical protein  32.01 
 
 
411 aa  84  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0174567  normal 
 
 
-
 
NC_009720  Xaut_4287  hypothetical protein  28.3 
 
 
341 aa  82  0.00000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.637696  normal  0.308708 
 
 
-
 
NC_010322  PputGB1_3186  hypothetical protein  29.06 
 
 
414 aa  79  0.00000000000008  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001115  hypothetical protein  29.1 
 
 
425 aa  79  0.00000000000009  Vibrio sp. Ex25  Bacteria  normal  0.401895  n/a   
 
 
-
 
NC_009784  VIBHAR_06671  hypothetical protein  29.63 
 
 
423 aa  78.6  0.0000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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