| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001115 |
|---|
| Symbol | |
|---|
| ID | 8559428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1280021 |
|---|
| End bp | 1281298 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408786 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003288265 |
|---|
| Protein GI | 262396412 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.401895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTA CAAATAGCTT CTTAATCAAC ATTAACCAAC AAAAATCCGT TGCTAAAAAA
AGGCTCAAAG CTATACGTCA ACACGATGAT GAGATGTTGG ATCGAGTTAA GCGATTTCAC
TCCAAACCAG AATCATTAGC TCCCAATACA ATTCAATTAG ATGACGTTCA ACATTCGCTA
GCCAGAGAAT TAGGTTTACC AAGTTGGAGT AAATTAAAAG CGCATGTCGA AGAGTTAGAA
GCTCACAAAG ACGCCATCAA AAAACACTTC CCTCCTCTTG ATAGCGAACT AAAAACGCTC
CATGTCCGCT GTGGGCATGA TATTCAGCAA CGGCTTAAAG ACAGCGGATT CGAGGGGACA
TTTTTAGCCC TGATAGATCC GCTTTGTATG GGTCCAATCC CAGCAACACC ACAAAACTTC
CTTGCCATTC GTGCCCAATA TGTCGTAGAG ACTCTGCTGC CCGTGATGAA GCGTGAGGAT
TCAGTGCAAG ATATTGTCAA ATTTGAGCAA GCTAATATTG ATACGCTGCT CAGTGATACA
TTTGAACGAA TCGTCTTTTG GGTCGAACAT GACAGCTATG ACCAATTAAT GCTGCTTCGT
GCCCTAACGT TGTTAGAGAA TGTAGAAAAC AAGGTGATAG AGATCATTGA GTTGAACCAG
TTTCCGGGCA CTGAGCGATT CATCGGCTTT GGGCAGTTGC CTGAAGAAGC TATTCGTTCT
TGTTGGCGAT ACCGTAAACC CGTGACAGCC AAATTATTCA GTCAGGCTAA ACATTCCTGG
CACGCTGTCA CATCACCGAC ACCCATCTCT ATGGTTAATT TGATCGAGCA GCATGATCTA
GATTGCTTAC CCAATATGCT CAACGTGCTA ATACGCCATA TGCAAGAGTT ACCTCATTCA
CAAACAGGAT TAAGCTTGAC TCAGCAGATT GCATTAGAGG TCCTAAGTTC TCAAAATCGT
TCAATTCTCA TCAAAGATTG GTTTGAGCAA TATCAACAAC GTGAACCTCT ACCTTACTTG
GGCGATGTGA TGTTTTACGC CTTACTCCTC CCTCTAGCAC AATGTCAAAC GCCTTTAATC
ACGATTGAGT CACGTGAAAG GGACTGGTGG GAACAGAGCG TCCATATAAC TGAGGCTGGT
CAGCATTGTT TGGAAGGCTT CATGCTAGCG AAGCAATGCT ATTGGGTTGG GGGTATTAGC
AATACCAATC AGAATTATTG GAGTTGGGAT CACCTCCAAT TATCTACATT GACCAACCAT
CATTGGTTCA GCGGATAG
|
|---|
| Protein sequence | MNSTNSFLIN INQQKSVAKK RLKAIRQHDD EMLDRVKRFH SKPESLAPNT IQLDDVQHSL
ARELGLPSWS KLKAHVEELE AHKDAIKKHF PPLDSELKTL HVRCGHDIQQ RLKDSGFEGT
FLALIDPLCM GPIPATPQNF LAIRAQYVVE TLLPVMKRED SVQDIVKFEQ ANIDTLLSDT
FERIVFWVEH DSYDQLMLLR ALTLLENVEN KVIEIIELNQ FPGTERFIGF GQLPEEAIRS
CWRYRKPVTA KLFSQAKHSW HAVTSPTPIS MVNLIEQHDL DCLPNMLNVL IRHMQELPHS
QTGLSLTQQI ALEVLSSQNR SILIKDWFEQ YQQREPLPYL GDVMFYALLL PLAQCQTPLI
TIESRERDWW EQSVHITEAG QHCLEGFMLA KQCYWVGGIS NTNQNYWSWD HLQLSTLTNH
HWFSG
|
|---|
| |