7 homologs were found in PanDaTox collection
for query gene Francci3_4104 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_4104  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
149 aa  309  9e-84  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6494  aromatic-ring-hydroxylating dioxygenase beta subunit  52.78 
 
 
154 aa  129  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4141  hydroxylacyl-CoA dehydrogenase  35.46 
 
 
150 aa  72.4  0.000000000002  Frankia sp. CcI3  Bacteria  normal  0.81248  normal 
 
 
-
 
NC_013510  Tcur_2764  hypothetical protein  35.04 
 
 
146 aa  71.2  0.000000000004  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00157353  n/a   
 
 
-
 
NC_007777  Francci3_4136  hypothetical protein  33.98 
 
 
152 aa  47  0.00008  Frankia sp. CcI3  Bacteria  normal  0.536365  normal 
 
 
-
 
NC_014210  Ndas_4660  aromatic-ring-hydroxylating dioxygenase beta subunit  35.92 
 
 
137 aa  45.4  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2736  aromatic ring hydroxylating dioxygenase beta subunit  28.8 
 
 
145 aa  42  0.003  Burkholderia xenovorans LB400  Bacteria  normal  0.37373  normal  0.0713641 
 
 
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