14 homologs were found in PanDaTox collection
for query gene Francci3_1559 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_1559  hypothetical protein  100 
 
 
88 aa  176  8e-44  Frankia sp. CcI3  Bacteria  normal  0.398033  normal  0.484756 
 
 
-
 
NC_008699  Noca_0283  hypothetical protein  47.56 
 
 
109 aa  70.1  0.000000000008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11756  hypothetical protein  43.9 
 
 
153 aa  69.3  0.00000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0215022 
 
 
-
 
NC_013595  Sros_4833  hypothetical protein  43.75 
 
 
85 aa  66.6  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5196  hypothetical protein  46.58 
 
 
92 aa  63.9  0.0000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.211561 
 
 
-
 
NC_013510  Tcur_2889  hypothetical protein  45.45 
 
 
88 aa  62.8  0.000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0362604  n/a   
 
 
-
 
NC_007333  Tfu_1962  hypothetical protein  47.37 
 
 
169 aa  62.8  0.000000002  Thermobifida fusca YX  Bacteria  normal  0.843602  n/a   
 
 
-
 
NC_014210  Ndas_1944  Domain of unknown function DUF1918  41.11 
 
 
168 aa  60.8  0.000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0473037  normal  0.0224139 
 
 
-
 
NC_008726  Mvan_1414  hypothetical protein  44.59 
 
 
92 aa  59.7  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0478  hypothetical protein  36.9 
 
 
89 aa  57.4  0.00000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12651  hypothetical protein  40 
 
 
93 aa  54.7  0.0000005  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  2.55176e-20  normal 
 
 
-
 
NC_013530  Xcel_0903  hypothetical protein  40.26 
 
 
160 aa  54.7  0.0000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2337  hypothetical protein  40.26 
 
 
89 aa  52  0.000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.598725  normal  0.918731 
 
 
-
 
NC_013595  Sros_1044  hypothetical protein  36.59 
 
 
89 aa  43.5  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0568279  normal  0.0249493 
 
 
-
 
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