12 homologs were found in PanDaTox collection
for query gene Fnod_R0053 on replicon NC_009718
Organism: Fervidobacterium nodosum Rt17-B1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009718  Fnod_R0053  tRNA-Gln  100 
 
 
74 bp  147  4.0000000000000006e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_R0018  tRNA-Gln  95.95 
 
 
74 bp  123  6e-27  Thermosipho melanesiensis BI429  Bacteria  normal  0.751418  n/a   
 
 
-
 
NC_009486  Tpet_R0017  tRNA-Gln  91.89 
 
 
74 bp  99.6  9e-20  Thermotoga petrophila RKU-1  Bacteria  normal  0.854869  n/a   
 
 
-
 
NC_010483  TRQ2_R0017  tRNA-Gln  91.89 
 
 
74 bp  99.6  9e-20  Thermotoga sp. RQ2  Bacteria  normal  0.826789  n/a   
 
 
-
 
NC_010003  Pmob_R0032  tRNA-Gln  89.55 
 
 
74 bp  77.8  0.0000000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_R0001  tRNA-Gln  89.09 
 
 
74 bp  61.9  0.00000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_R0001  tRNA-Gln  89.09 
 
 
74 bp  61.9  0.00000002  Anaeromyxobacter sp. K  Bacteria  normal  0.570603  n/a   
 
 
-
 
NC_011891  A2cp1_R0001  tRNA-Gln  89.09 
 
 
74 bp  61.9  0.00000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.939464  n/a   
 
 
-
 
NC_014212  Mesil_R0009  tRNA-Gln  88.89 
 
 
74 bp  60  0.00000007  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_R0001  tRNA-Gln  87.27 
 
 
74 bp  54  0.000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_R0025  tRNA-Gln  93.75 
 
 
74 bp  48.1  0.0003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0713301  normal  0.06286 
 
 
-
 
NC_013501  Rmar_R0046  tRNA-Gln  85 
 
 
71 bp  48.1  0.0003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.103018  n/a   
 
 
-
 
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