7 homologs were found in PanDaTox collection
for query gene Elen_1659 on replicon NC_013204
Organism: Eggerthella lenta DSM 2243



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013204  Elen_1659  DNA-directed RNA polymerase, omega subunit  100 
 
 		 86 aa  177  5.999999999999999e-44  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00146149  hitchhiker  0.000405802 
 
 
-
 
NC_013170  Ccur_07790  DNA-directed RNA polymerase, omega subunit  79.07 
 
 		 86 aa  148  3e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.343495  normal  0.692995 
 
 
-
 
NC_013165  Shel_11920  hypothetical protein  74.42 
 
 		 86 aa  140  7e-33  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.0000125456  normal  0.032321 
 
 
-
 
NC_013203  Apar_0807  hypothetical protein  44.58 
 
 		 94 aa  69.3  0.00000000002  Atopobium parvulum DSM 20469  Bacteria  normal  0.29318  normal  0.858288 
 
 
-
 
NC_013124  Afer_1694  DNA-directed RNA polymerase, omega subunit  39.53 
 
 		 94 aa  42  0.003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008528  OEOE_1230  DNA-directed RNA polymerase, subunit K/omega  34 
 
 		 107 aa  41.6  0.004  Oenococcus oeni PSU-1  Bacteria  normal  0.763908  n/a   
 
 
-
 
NC_014165  Tbis_1361  DNA-directed RNA polymerase, omega subunit  33.77 
 
 		 88 aa  40  0.01  Thermobispora bispora DSM 43833  Bacteria  normal  0.465047  normal  0.0594438 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>