7 homologs were found in PanDaTox collection
for query gene Ccur_07790 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013170  Ccur_07790  DNA-directed RNA polymerase, omega subunit  100 
 
 		 86 aa  175  2e-43  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.343495  normal  0.692995 
 
 
-
 
NC_013204  Elen_1659  DNA-directed RNA polymerase, omega subunit  79.07 
 
 		 86 aa  148  3e-35  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00146149  hitchhiker  0.000405802 
 
 
-
 
NC_013165  Shel_11920  hypothetical protein  73.26 
 
 		 86 aa  141  3e-33  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.0000125456  normal  0.032321 
 
 
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NC_013203  Apar_0807  hypothetical protein  46.75 
 
 		 94 aa  70.1  0.00000000001  Atopobium parvulum DSM 20469  Bacteria  normal  0.29318  normal  0.858288 
 
 
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NC_013124  Afer_1694  DNA-directed RNA polymerase, omega subunit  36.84 
 
 		 94 aa  46.6  0.0001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
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NC_008528  OEOE_1230  DNA-directed RNA polymerase, subunit K/omega  32.69 
 
 		 107 aa  43.5  0.001  Oenococcus oeni PSU-1  Bacteria  normal  0.763908  n/a   
 
 
-
 
NC_010816  BLD_1964  DNA-directed RNA polymerase subunit omega  33.8 
 
 		 94 aa  40.8  0.006  Bifidobacterium longum DJO10A  Bacteria  normal  0.574047  n/a   
 
 
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