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6 homologs were found in PanDaTox collection
for query gene
EcSMS35_3139
on replicon NC_010498
Organism:
Escherichia coli SMS-3-5
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009788
EcE24377A_D0039
95.18
519 bp
831
Escherichia coli E24377A
Bacteria
normal
0.514774
n/a
-
NC_009790
EcE24377A_E0067
95.65
1151 bp
1053
Escherichia coli E24377A
Bacteria
normal
1
n/a
-
NC_010498
EcSMS35_3139
100
671 bp
1330
Escherichia coli SMS-3-5
Bacteria
normal
1
normal
1
-
NC_010660
SbBS512_A0139
94.61
243 bp
367
3e-99
Shigella boydii CDC 3083-94
Bacteria
normal
1
n/a
-
NC_010498
EcSMS35_4773
hypothetical protein
88.98
300 bp
264
3e-68
Escherichia coli SMS-3-5
Bacteria
normal
0.518043
normal
0.771182
-
NC_010660
SbBS512_A0140
94.67
423 bp
264
3e-68
Shigella boydii CDC 3083-94
Bacteria
normal
1
n/a
-
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