6 homologs were found in PanDaTox collection
for query gene EcSMS35_3139 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009788  EcE24377A_D0039    95.18 
 
 
519 bp  831    Escherichia coli E24377A  Bacteria  normal  0.514774  n/a   
 
 
-
 
NC_009790  EcE24377A_E0067    95.65 
 
 
1151 bp  1053    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3139    100 
 
 
671 bp  1330    Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010660  SbBS512_A0139    94.61 
 
 
243 bp  367  3e-99  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4773  hypothetical protein  88.98 
 
 
300 bp  264  3e-68  Escherichia coli SMS-3-5  Bacteria  normal  0.518043  normal  0.771182 
 
 
-
 
NC_010660  SbBS512_A0140    94.67 
 
 
423 bp  264  3e-68  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>