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6 homologs were found in PanDaTox collection
for query gene
EcE24377A_D0039
on replicon NC_009788
Organism:
Escherichia coli E24377A
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009788
EcE24377A_D0039
100
519 bp
1029
Escherichia coli E24377A
Bacteria
normal
0.514774
n/a
-
NC_009790
EcE24377A_E0067
97.62
1151 bp
906
Escherichia coli E24377A
Bacteria
normal
1
n/a
-
NC_010498
EcSMS35_3139
95.18
671 bp
831
Escherichia coli SMS-3-5
Bacteria
normal
1
normal
1
-
NC_010660
SbBS512_A0139
96.27
243 bp
398
1e-109
Shigella boydii CDC 3083-94
Bacteria
normal
1
n/a
-
NC_010498
EcSMS35_4773
hypothetical protein
88.98
300 bp
264
2e-68
Escherichia coli SMS-3-5
Bacteria
normal
0.518043
normal
0.771182
-
NC_010660
SbBS512_A0140
100
423 bp
61.9
0.0000002
Shigella boydii CDC 3083-94
Bacteria
normal
1
n/a
-
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