8 homologs were found in PanDaTox collection
for query gene Dshi_1277 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_1277  hypothetical protein  100 
 
 
80 aa  158  2e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.092151  normal  0.165919 
 
 
-
 
NC_008254  Meso_0454  hypothetical protein  48.33 
 
 
68 aa  60.5  0.000000007  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3182  hypothetical protein  43.1 
 
 
107 aa  56.2  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.434736  normal 
 
 
-
 
NC_009654  Mmwyl1_4077  hypothetical protein  36.21 
 
 
69 aa  50.8  0.000006  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2917  hypothetical protein  37.93 
 
 
94 aa  49.3  0.00002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.125733  normal  0.950644 
 
 
-
 
NC_008686  Pden_1673  hypothetical protein  46.81 
 
 
61 aa  48.1  0.00004  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0079  hypothetical protein  35.38 
 
 
68 aa  47  0.00008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1415  hypothetical protein  40 
 
 
65 aa  46.6  0.0001  Jannaschia sp. CCS1  Bacteria  normal  0.0967796  normal  0.0296482 
 
 
-
 
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