12 homologs were found in PanDaTox collection
for query gene Avi_0079 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_0079  hypothetical protein  100 
 
 
68 aa  140  8e-33  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4470  hypothetical protein  42.65 
 
 
84 aa  63.2  0.000000001  Sinorhizobium medicae WSM419  Bacteria  hitchhiker  0.00680469  normal 
 
 
-
 
NC_008686  Pden_1673  hypothetical protein  53.85 
 
 
61 aa  61.2  0.000000004  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2917  hypothetical protein  42.86 
 
 
94 aa  60.8  0.000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.125733  normal  0.950644 
 
 
-
 
NC_012850  Rleg_3182  hypothetical protein  43.55 
 
 
107 aa  58.2  0.00000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.434736  normal 
 
 
-
 
NC_007802  Jann_1415  hypothetical protein  42.19 
 
 
65 aa  55.1  0.0000003  Jannaschia sp. CCS1  Bacteria  normal  0.0967796  normal  0.0296482 
 
 
-
 
NC_009428  Rsph17025_3110  hypothetical protein  48.28 
 
 
63 aa  55.1  0.0000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0396397  normal  0.0247031 
 
 
-
 
NC_007493  RSP_2087  hypothetical protein  45.76 
 
 
86 aa  52.8  0.000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0762  hypothetical protein  46.55 
 
 
63 aa  52  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1277  hypothetical protein  35.38 
 
 
80 aa  47  0.00008  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.092151  normal  0.165919 
 
 
-
 
NC_008254  Meso_0454  hypothetical protein  36.73 
 
 
68 aa  43.5  0.001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4077  hypothetical protein  31.25 
 
 
69 aa  40.4  0.008  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
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