5 homologs were found in PanDaTox collection
for query gene Dfer_5474 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_5474  hypothetical protein  100 
 
 
314 aa  649    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0672  integrase family protein  21.78 
 
 
408 aa  54.7  0.000002  Spirosoma linguale DSM 74  Bacteria  normal  0.637473  normal  0.194425 
 
 
-
 
NC_010571  Oter_4353  integrase family protein  25.84 
 
 
470 aa  53.5  0.000004  Opitutus terrae PB90-1  Bacteria  normal  0.130136  normal 
 
 
-
 
NC_013421  Pecwa_0710  integrase family protein  23.58 
 
 
324 aa  44.7  0.002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2355  phage integrase family site specific recombinase  30.28 
 
 
334 aa  43.1  0.006  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
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