| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4353 |
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| Symbol | |
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| ID | 6205149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5648604 |
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| End bp | 5650016 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641694020 |
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| Product | integrase family protein |
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| Protein accession | YP_001821225 |
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| Protein GI | 182416159 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.130136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGG AACTACGTTA TCCGCGCAGC AAGTGGTGGT ATGGCCGCGT CGCGATTGGT
GAACGTCGGA TTCTTAAAAA CCTCGCGGTG GAAGTCCGTG GCAGCGTCCC GCCCACGCTG
ACCGAACTCG GCGACATGGC TTTCGAGCGC ACGCGCGCGA AGGCGCAAGC CGCCCTCGAA
AAACTGCAAC TCGATCTGAA GCGACGCGCC AGCGCGGAGG AACTGGTGCA GACGATCCAC
GAAATCCGGA CGGGCGCGCG GGTCAGTTCG ATCCCGCTCG CTGAAATCGG CGCCCGATGG
TGCGCAGTCC TCCGCCGCCG TCCCCTCAGC GCGAGCTACC AAAAACAGAA GGTCGCCTGC
ATCGAGCGGT TCATCCGTTT CGCGAAGAAA GCCTCCCCTT CGCTCTACGA AATGGCGCAA
GTCCAGGCTC CGCTGGCCAA CGCCTTTTGT CGGGCGGAGC TGGCGCGCGG CGTCGCCGCC
AAGACCTACA ACCACACCTT GATTCATCTG CGGTCGGTGT TTCACGTGCT ACGCAAGGAA
GCGGGCATTG CGGAAAATCC GTTTGCGACC ATCCCCCTCC AGGATGGCGA GACGGTTTTC
CGAAAGCCTT TCTCGGTCGA GGAACTCTCG TTGCTCGAAG AGAAAGCCCA GGCCGATCCC
TTCATCTATC CGCTTATCGT CACCGGCATG TGCACCGCGA TGCGCCGCGG CGACTGCTGC
ACGCTCCGGC GCAGCTCGGT TGACCTCGAA GGCGGCTTTG TGACCGTAAA AACGGCGAAG
ACCGGTGAGA CGGTGCAAAT CCCGATCTTC CCGCTTCTGC GGAGCGTGTT GGAAAAGGCG
TTGGCGAAGC CGGCTCCCCG CCCGCCGTTC TATGTCTTCC CGGAATTGGA GGCACATTAC
CGGCTCAATC CGGATCACCT CACCGATCGG GTGCGCCGGG TGATGAAGGC GGCGGGCTTC
TTCAATCCGA AGGATAACGA GGACGCGCCG TCGCGTGGCG CCGTGCAGCA GGAACGCGAG
CACGGGCTGC GCAAGGCCTC GCTCCGCGAT TTTCATTCGC TCCGCGTGAC GTGGGTGACG
GTGGCACTCA CGGCCGGCGT GCCGCTGGAA ATCGTGCAGA AGGTCACCGG GCACCGCACC
ACGGCGATTG TGCTCAAGCA CTATTTCCAG CCCGGACGGG AAGAGTTTCG GCGCACCCTG
GCCGGCCGGC TGCCGGCGCT GTTGGGTGAG CGCTCGAAGC CGACGTCCCC TCCGCCTGAG
GCATTCAACG TGGACGAACT ACGCGCTAAA CTCACCGCGA TGGAGGCATC GACGTGGCGG
CACACCCGGG ACGAACTGCT CACGCGCTTG CCACTGGAGG TGAAGGTCAC GCCCCCGGCG
AAGTCCCTCC TCGAACCGTC CTTCGCGGCA TGA
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| Protein sequence | MALELRYPRS KWWYGRVAIG ERRILKNLAV EVRGSVPPTL TELGDMAFER TRAKAQAALE
KLQLDLKRRA SAEELVQTIH EIRTGARVSS IPLAEIGARW CAVLRRRPLS ASYQKQKVAC
IERFIRFAKK ASPSLYEMAQ VQAPLANAFC RAELARGVAA KTYNHTLIHL RSVFHVLRKE
AGIAENPFAT IPLQDGETVF RKPFSVEELS LLEEKAQADP FIYPLIVTGM CTAMRRGDCC
TLRRSSVDLE GGFVTVKTAK TGETVQIPIF PLLRSVLEKA LAKPAPRPPF YVFPELEAHY
RLNPDHLTDR VRRVMKAAGF FNPKDNEDAP SRGAVQQERE HGLRKASLRD FHSLRVTWVT
VALTAGVPLE IVQKVTGHRT TAIVLKHYFQ PGREEFRRTL AGRLPALLGE RSKPTSPPPE
AFNVDELRAK LTAMEASTWR HTRDELLTRL PLEVKVTPPA KSLLEPSFAA
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