10 homologs were found in PanDaTox collection
for query gene Dfer_4998 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_4998  hypothetical protein  100 
 
 
416 aa  856    Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00000178867  normal  0.384505 
 
 
-
 
NC_013730  Slin_2230  hypothetical protein  42.68 
 
 
417 aa  243  6e-63  Spirosoma linguale DSM 74  Bacteria  normal  0.110242  normal  0.383311 
 
 
-
 
NC_013501  Rmar_1839  hypothetical protein  42.09 
 
 
390 aa  190  5e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  0.741802  n/a   
 
 
-
 
NC_002950  PG0516  hypothetical protein  33.82 
 
 
415 aa  189  1e-46  Porphyromonas gingivalis W83  Bacteria  n/a    decreased coverage  0.00403356 
 
 
-
 
NC_010717  PXO_00452  hypothetical protein  27.55 
 
 
426 aa  115  1.0000000000000001e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.117747  n/a   
 
 
-
 
NC_011071  Smal_1348  hypothetical protein  27.84 
 
 
416 aa  114  4.0000000000000004e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.064985  normal 
 
 
-
 
NC_009441  Fjoh_0289  hypothetical protein  28.65 
 
 
379 aa  112  2.0000000000000002e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1887  hypothetical protein  29.24 
 
 
366 aa  108  3e-22  Xylella fastidiosa M23  Bacteria  normal  0.0161931  n/a   
 
 
-
 
NC_010513  Xfasm12_1952  hypothetical protein  30.1 
 
 
366 aa  100  6e-20  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5136  hypothetical protein  28.52 
 
 
405 aa  86.3  0.000000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
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