| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00452 |
|---|
| Symbol | |
|---|
| ID | 6305403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1948692 |
|---|
| End bp | 1949972 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642639172 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001913045 |
|---|
| Protein GI | 188576116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.117747 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCTGT CGCATGGCAT GACCGCTGCA GCGCAGGTGA GCTGCAGCGC CCGGCGTCGG
GCTGCATGCT GGCTGTTCGC ATTGCTGGCA CTGTTGGTGA CGCCGGCCAC CGTCGCGCAA
GTCGCGCACG CGCCCGCCCC GGAAGCCGCC ACTGCGTCCC GGCCGGCACC GCGGGTCGGC
GTGTTGACCA TGCAGCCGGG CGAAGTGTTT TTCGAACGCT TCGGTCACGA TGCCATCGTG
GTGGTCGACC CGCGTACGCA ACAGGCCACC TCGTACAACT TCGGCTTCTT CGACCCGAGC
GAGGCGGATT TCATGCCGCG TTTTGCGCGT GGCGAAATGA TGTACTACCT GGTCGCGCTA
CCGCTGGAAG AAGACCTGTC GCAGTATCGC GATGCCGGCC GCGGTGTCAG CATCCAGTGG
CTGGATCTGC CGCCAGATCA GGCGCGTGCG CTGGCCGACG GTCTGGCAGT GCGTAGCCAA
CCGGAAAACG CGCGCTACCA CTACGATTAC TTCATGACCA ACTGCGCCAC CATGGTCCGC
GACACGCTGG ACCGTGCGAT GGGCGGCACG CTCAAATCGC AACTGGCCGG CCGTTCGCGT
GGCAACACCT TCCGCAGCGA AGCGATTCGC CTGGCCTCCC CGGCCCCATG GATGTGGCTG
GGCTTCGACC TGGGCCTGGG GCCGTACGCA GACCGCCCGT TGTCGCGCTG GGAAGAAGCC
TTCATCCCGA TGCGGCTGGC TGACAACCTG ACCCAGGTGC ACAACAGCAC CGGTCGCCCG
TTGGTGCAAT CCACGCAGGT ATTGCTGCCG CATCGCATCG CGCCGGAGCC CGCCGAACAA
CAGCGACACT GGTGGCCGTG GCTGTTGACC GGGCTCATCG TGGCCGCAGG CGTGCTGGCC
TTGGGCCGCA GGCAGCGCCT GCTGGCCGGA CTGGCGCTGC CGTTCTGGCT CTTTTGCGCC
ATCGGCGGTG GTGTGCTGGT GTATCTGTGG GGATTCACTG CGCATCAATC GGCATGGGCC
AACCGCAATC TGCTGCTGGT CAATCCACTG TGTGTCTTGC TGTGGTGCGG TGGCATCCGG
TTGCAGTTGG GCCATCGGCC GGGCCGCTGG TTCAACGTGC TGTCCTGGGT TGTCGCTGCG
TGTGCGCTGG CGGCACTGTT GATTCACTGG CTGTCGTTCC AGGCGCAGGA CAACCTGCAA
TGGATCATGC TGCTGTTGCC GATCCACACC GCGCTCGCCC TTGCCCTGCT GGCGCGTGAC
CTGCCCGTCC GCATACGCTG A
|
|---|
| Protein sequence | MNLSHGMTAA AQVSCSARRR AACWLFALLA LLVTPATVAQ VAHAPAPEAA TASRPAPRVG
VLTMQPGEVF FERFGHDAIV VVDPRTQQAT SYNFGFFDPS EADFMPRFAR GEMMYYLVAL
PLEEDLSQYR DAGRGVSIQW LDLPPDQARA LADGLAVRSQ PENARYHYDY FMTNCATMVR
DTLDRAMGGT LKSQLAGRSR GNTFRSEAIR LASPAPWMWL GFDLGLGPYA DRPLSRWEEA
FIPMRLADNL TQVHNSTGRP LVQSTQVLLP HRIAPEPAEQ QRHWWPWLLT GLIVAAGVLA
LGRRQRLLAG LALPFWLFCA IGGGVLVYLW GFTAHQSAWA NRNLLLVNPL CVLLWCGGIR
LQLGHRPGRW FNVLSWVVAA CALAALLIHW LSFQAQDNLQ WIMLLLPIHT ALALALLARD
LPVRIR
|
|---|
| |