Gene Hoch_5136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5136 
Symbol 
ID8547547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7074366 
End bp7075583 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID646389812 
Producthypothetical protein 
Protein accessionYP_003269517 
Protein GI262198308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCGC GCCGCCACCT CGCCACGCTG TCCTTTCTGC TCGCGTCTGC GTTCGCCGTA 
GCGGCGCTCG CGCCCGCCCA CGCTCAGCCG GCGCCGGAGC CCGCCCACGC TCAGCCGGCG
CCGGCGCAGG CCGACGCCGG TACGGCCAGC GCCGACGGGC CGGCCCCGGT CATCGAGCTG
TGGACCATGG GGCCCGGCGA TTTGATCTGG GAGAAATACG GTCACACCGC GCTGTGCACG
CGCTACCCCG ACCCGCGCGA CGACCGCTGC TACAACTACG GCACGACCAA CTTCGCCGAG
CCGGTGAAGC TGGTCTGGGA CTTTCTGCGC AACCGCACCA AGTTCTGGGT CTCGACCACC
ACGCCGACGC GCATCATGCG CTTCTACAGC CAGGTGCTCG ACCGCTCGAT CTGGGTGCAG
CCGCTGCCGC TCTCGCCCGA GGGCGCGCGC CACGCCGCGC AGGTGCTGGA GACCAGCACG
CTGCCCGAGA ATAAGTTCTA TCGCTACCAC CACTACGATG ACAACTGCGC CACCCGGGTG
CGCGACATCG TCGACGAGGT CACCGACGGC GGGCTGCAGG CGGCGCGCGA GGACTCCTAT
CCGTACTCGC TGCGCGAGAT CACGCGCCGG GGCATGACCG AGCACGGCAT CCTGTCGCTG
CTGGTCGATT TTCCGCTGGG GCGCCGCTCC GATCGCGTGC CCGACGGCTG GGACGCCATG
CACCAGCCCG ACATGCTGCG GGTCGCGGTC GAGAAGCACC TGGGCATCGA ACCGGTACAG
ATCTACGAAC GCCAAGGCGC GCCCTTCGAC GTCTCGCATC CGATCGCGCG CTGGTGGCTG
ATGCTCATGG GCCTCGGCTT TGCGCTGCCG GCCCTGCTCA CCTGGTACCT GGGCCGCTTT
CAGCGCCTCG GCCTGGGGCT GTCGATCGCG CCGGCCGGGC TGGTGGGTCT GCTCCTGTGG
GTCATGGCCA CGATCAGCAC GCTCCCCGAG ATCCGCTGGA ACGAGGCCAT CCTGGTCATG
TGGCCGCTGG ATCTGCTGCT GCCGGTGCTG CCGCTGCGGC TGCGCCAGCG CTACGCGCGC
TTCCGCTTGC TGTGGTCGCT GGGCCTGCTG CTGCTGTCGC TGATCGGCGT GTTGCACCAG
CCGCTGTGGG CCATCCTGAT GTGGCCGGCG GCCACCTGCG CGATCGCGGC GCTGCCGGCG
CGCAAGCGCG AGACCTGA
 
Protein sequence
MLSRRHLATL SFLLASAFAV AALAPAHAQP APEPAHAQPA PAQADAGTAS ADGPAPVIEL 
WTMGPGDLIW EKYGHTALCT RYPDPRDDRC YNYGTTNFAE PVKLVWDFLR NRTKFWVSTT
TPTRIMRFYS QVLDRSIWVQ PLPLSPEGAR HAAQVLETST LPENKFYRYH HYDDNCATRV
RDIVDEVTDG GLQAAREDSY PYSLREITRR GMTEHGILSL LVDFPLGRRS DRVPDGWDAM
HQPDMLRVAV EKHLGIEPVQ IYERQGAPFD VSHPIARWWL MLMGLGFALP ALLTWYLGRF
QRLGLGLSIA PAGLVGLLLW VMATISTLPE IRWNEAILVM WPLDLLLPVL PLRLRQRYAR
FRLLWSLGLL LLSLIGVLHQ PLWAILMWPA ATCAIAALPA RKRET