10 homologs were found in PanDaTox collection
for query gene Cpin_7133 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_7133  hypothetical protein  100 
 
 
35 aa  73.6  0.0000000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4871  putative short chain dehydrogenase  58.82 
 
 
495 aa  47  0.00009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00534901  normal  0.736841 
 
 
-
 
NC_013131  Caci_0884  putative short chain dehydrogenase  58.82 
 
 
570 aa  45.4  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.51688 
 
 
-
 
NC_008726  Mvan_1920  putative short chain dehydrogenase  58.82 
 
 
500 aa  44.7  0.0004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4441  putative short chain dehydrogenase  58.82 
 
 
474 aa  43.9  0.0007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0270  putative short chain dehydrogenase  55.88 
 
 
503 aa  43.1  0.001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0850168  normal  0.113236 
 
 
-
 
NC_013093  Amir_4251  oxidoreductase, short chain dehydrogenase/reductase family  53.12 
 
 
447 aa  42  0.003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.044314  n/a   
 
 
-
 
NC_013093  Amir_5303  oxidoreductase  52.94 
 
 
463 aa  41.2  0.005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2398  oxidoreductase  53.12 
 
 
437 aa  40.8  0.006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.683331 
 
 
-
 
NC_013530  Xcel_1055  oxidoreductase  52.94 
 
 
507 aa  40.4  0.009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.730863  n/a   
 
 
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