Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1920 |
Symbol | |
ID | 4648011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2048639 |
End bp | 2050141 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639805407 |
Product | putative short chain dehydrogenase |
Protein accession | YP_952746 |
Protein GI | 120402917 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGAAC TTATTCGAAC GTCGGGGATC CCGTCACCCC TGCTAGTGGA GATGGGGTTC ATGGAGAGCC CGTACGCTTC CCGGGTGAAC GCGATCGATC CGGACAAGCT CATCACCTGT CTGCAGGTGC TGGCCGACAT CGAGGCCCTG CCTCCCGAGC ACCCCGATGC CGTCGCTGTC CGCCGGGCCA CGGCCGGCAT CTTCAAATCG GTGAGAAAGG CTCGTCGCGC CGCCAAGCGC GACGCCGTGG CCGCCGCCGA CGACGCCATC ACCGCGGCCA CCGCCACCGG TGCGCCCGGC CGCATCGACG ACGAGACGCA GGGTCTGCCG CTGGTGTCCA CCACCGTCGG CGCCACCGCC GGCACGCTGC TGCGTCCGCG CGCCTGCTAC ATCTGCAAGA ACCGGTACAC CGTGGTCGAC GCGTTCTACC ACCAACTCTG CCCCGACTGC GCTGCCCTGA ACCGGGCCAA GCGCGACGCC CGCACCGACC TCACCGGCAG GCGCGCCCTG CTCACCGGCG GTCGCGCCAA GATCGGCATG TACATCGCCC TGCGACTGCT GCGCGACGGC GCCCACACCA CCATCACCAC CCGCTTCCCC AACGATGCCG TGCGCCGTTT CGCAGCGATG CCCGACAGCG CCGACTGGCT GCACCGACTG CGGATCGTCG GTATCGACCT GCGGGACCCG GCGCAGGTGG TCGCCCTCGC CGACGCCGTG GCCGCGCAGG GCCCGCTGGA CATCCTGATC AACAACGCCG CGCAGACCGT GCGCCGGTCG CCCGGTGCCT ATGCGGCACT CGTCGAGACG GAACGCACGC CGCCGCCGGA GATCGTGGAC GTGCTGACGT TCGACCGGGT CAGCGACGCC CACCCGGCCG CGCTCGCCGG CAGCCTGGCC GCAAACCCCA CTCCGCACCA GGTGGCCGAG CTGGCGCTGA CTGCCCGCAG CGCCTCCCCG GACCGGATCG CCGCGGGCAC CGCCATCGAC GCGGGCGGCC TGCTGCCCGA CACGGCCCCG GTGAACAGCT GGACCCAGCG GGTCCACGAG GTCGACGCGA TGGAACTGCT GGAGGTGCAG CTGTGCAACC AGACCGCGCC GTTCATCCTG GTGAGCCGGC TGCGCCCGGC GATGGCCGCC GCACCTGCGC GTCGCACCTA CGTCGTGAAT GTCTCCGCGA TGGAGGGTCA GTTCAGCCGG GCATACAAGG GCCCGGGTCA TCCGCACACC AACATGGCCA AGGCCGCGCT GAACATGCTG ACCCGCACGA GCGCCGGTGA GATGTTGGAG CGCGACGGCA TTCTGATGAC CGCCGTGGAC ACCGGCTGGA TCACCGACGA GCGCCCGCAC CCGACGAAGC TGCGGCTCGC AGAGGAGGGG TTTCACGCCC CGCTGGACCT GGTCGACGGG GCTGCGCGCG TGTACGACCC GATCGTGCGC GGCGAGGCCG GCGAAGATCT GCACGGCTGC TTTTTGAAGG ACTACTCGCC GTCCAACTGG TAG
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Protein sequence | MSELIRTSGI PSPLLVEMGF MESPYASRVN AIDPDKLITC LQVLADIEAL PPEHPDAVAV RRATAGIFKS VRKARRAAKR DAVAAADDAI TAATATGAPG RIDDETQGLP LVSTTVGATA GTLLRPRACY ICKNRYTVVD AFYHQLCPDC AALNRAKRDA RTDLTGRRAL LTGGRAKIGM YIALRLLRDG AHTTITTRFP NDAVRRFAAM PDSADWLHRL RIVGIDLRDP AQVVALADAV AAQGPLDILI NNAAQTVRRS PGAYAALVET ERTPPPEIVD VLTFDRVSDA HPAALAGSLA ANPTPHQVAE LALTARSASP DRIAAGTAID AGGLLPDTAP VNSWTQRVHE VDAMELLEVQ LCNQTAPFIL VSRLRPAMAA APARRTYVVN VSAMEGQFSR AYKGPGHPHT NMAKAALNML TRTSAGEMLE RDGILMTAVD TGWITDERPH PTKLRLAEEG FHAPLDLVDG AARVYDPIVR GEAGEDLHGC FLKDYSPSNW
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