5 homologs were found in PanDaTox collection
for query gene Cpin_6055 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_6055  hypothetical protein  100 
 
 
381 aa  771    Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3940  hypothetical protein  39.46 
 
 
350 aa  258  9e-68  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.312804  normal  0.274846 
 
 
-
 
NC_009441  Fjoh_1410  PKD domain-containing protein  37 
 
 
439 aa  244  1.9999999999999999e-63  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1609  surface layer protein  26.02 
 
 
340 aa  48.5  0.0002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0932034  normal  0.780002 
 
 
-
 
NC_009441  Fjoh_1874  hypothetical protein  24.52 
 
 
385 aa  43.5  0.007  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
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