Gene Fjoh_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1410 
Symbol 
ID5093193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1615702 
End bp1617021 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content36% 
IMG OID644740816 
ProductPKD domain-containing protein 
Protein accessionYP_001193761 
Protein GI146299170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACA ATTTTTTTTC TAAGCAATTA ATCGCCATTG CTTCTTTAAT GATGCTGGTA 
ACTTCATGTA ATAATGATGA TGATTTTACG GCGGCGCCTG TAATCAAGGG AGAACAGCAG
TTAAAAGATA CTTTGACAAT TGGAAAAACA CTTCAGCTGA GTTCAAAAAT AAAAGACAGA
AATAATGTTT CATTTGAATG GGCAGTAAAC GGAAATGTTG TAGGATCTGA TTCGACATAT
ACTTTTAAAC CAGAAACAAG AGGAGATTTT AAAATTACGA TGACTGCTAA AAACAATGGC
GGAAACGTAT CTCTAACTTA CGATATTCAC ACATTTGGAG CTTATGAAAA CGGATTCTTT
ATGATTAATG AAGGATGGTT TGGGCATGGA ACAGGAACAG TTGGGTTTTA CAGATACGAT
ACAAAAGCAA TAGAAGACAG TGTTTTTGTA AAAGTAAATC CAGATAAAGA TTTAAAACCA
GAATCGTCAA CTTTAGAGTT TGGAACTGTC TTTAATAAAA AGCTATTCTT GGTGTCTAAA
GTCGGCGGAC CGGTTGTAGT TGCAGATGCT TATTCGCTTA AAGAAGAAAA AAGAATTCCG
GCTCAGGGTG GAAACGACTG GCGTGCGATA GTTGGAATTG ATGAAAATCA GGCTTTGCTT
ACTTCTGGAA AAGGAATATT CAAACTTAAT TTGAATACAA TGGAATTAAA CGGACAAGTT
GAAGGAATTA CAGGTCAGGT AGGAGACATT GTAAAAGTTA ACGGATTCAT TTTTGCATTG
TCGGCATCAA AAGGGGTTAT TGTAATTAAT GCTACAACAT TAGCAGTCGA AAAAACAATT
TCAGGAATGG TTCTGGGATT TGCTGTTACT GATGATAAAA AAGTATGGGC CGCAGGCGGA
ACAAAACTTA TCAATATAGA CTCTAATACT CTTGAGGTAA AAGAAATCGC ATTAGGTTTT
CAGGCTTACG GAAGCTGGGG AGCCTGGCAT CCGGGATCTA TTACAGCTGC AAAAAATGCT
GTTTTCATTG CCAAAAATGG AAGCTGGAGC GGTGGTAAAG AAATTTATAA ATATAACGGA
GATGTTTCTT CATTAGCTTC GCCTTTTGTT ACATTAACAG ATTCTAATAT ATTATATGGA
GCGGGAATTG GATATGATAA AAAGAAAAAC ACTTTAGTAA TTAATACAGT AAACGAAGGA
TATGGAGCAA ATTTTGCGAT CAATAACCTT TATTTATTCA ATGGAGATTC TGGAGCTAAA
ACAGGAACAG TAAGTTTTTC AGGATATTAT TTCCCGGCGG TTTCTGTGTT CCATCAATAA
 
Protein sequence
MRNNFFSKQL IAIASLMMLV TSCNNDDDFT AAPVIKGEQQ LKDTLTIGKT LQLSSKIKDR 
NNVSFEWAVN GNVVGSDSTY TFKPETRGDF KITMTAKNNG GNVSLTYDIH TFGAYENGFF
MINEGWFGHG TGTVGFYRYD TKAIEDSVFV KVNPDKDLKP ESSTLEFGTV FNKKLFLVSK
VGGPVVVADA YSLKEEKRIP AQGGNDWRAI VGIDENQALL TSGKGIFKLN LNTMELNGQV
EGITGQVGDI VKVNGFIFAL SASKGVIVIN ATTLAVEKTI SGMVLGFAVT DDKKVWAAGG
TKLINIDSNT LEVKEIALGF QAYGSWGAWH PGSITAAKNA VFIAKNGSWS GGKEIYKYNG
DVSSLASPFV TLTDSNILYG AGIGYDKKKN TLVINTVNEG YGANFAINNL YLFNGDSGAK
TGTVSFSGYY FPAVSVFHQ