7 homologs were found in PanDaTox collection
for query gene Cpin_5090 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_5090  hypothetical protein  100 
 
 
345 aa  697    Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00121572  normal  0.459715 
 
 
-
 
NC_013132  Cpin_6168  hypothetical protein  32.32 
 
 
352 aa  138  1e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00614919 
 
 
-
 
NC_009441  Fjoh_1211  hypothetical protein  29.57 
 
 
360 aa  132  1.0000000000000001e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_05050  hypothetical protein  29.75 
 
 
487 aa  101  2e-20  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0630  hypothetical protein  26.97 
 
 
348 aa  76.3  0.0000000000008  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1407  hypothetical protein  26.25 
 
 
366 aa  65.1  0.000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.235171  n/a   
 
 
-
 
NC_014230  CA2559_05055  hypothetical protein  24.68 
 
 
363 aa  57  0.0000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.51748  n/a   
 
 
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