| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5090 |
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| Symbol | |
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| ID | 8361266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6337422 |
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| End bp | 6338459 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967238 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124723 |
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| Protein GI | 256424070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00121572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.459715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCT GGTTGAATAA AATTATTGCA GGAAGTTTAT GTGTGTTGGC GCTCGCCTCC
TGTGAAAAAC AGGACAGCTT CACACAGGTG AAGACAGGTA CAACGCCTGC CTTTTCTGCG
ACAGCAACTG AATTTGTGTT TTCTGCGGAT AAGGCTTCAG AAAATGCGGT AACCTATACG
TGGACCGCTT CTCAGGACTG GGGATACAGA GCCGTAGTAA ACTATACGCT GGAAGTAGCT
GAAAAAGGAA ATGGTTTCAG AAACGCTTCG GAAATATTCA GTGCTAATAA CGGACTGACT
AAAACCTTCA CTGTTGCGCA GCTAAATCAG GCGATCAATA ATATGGGCCT GGCTGCCGGT
CGTGAACACC AGTTGGTGAT CCGTGTAAAA GCAGCGGTAG ATACAATAGG AGATAAGGTA
TACTCTGACA GCGTACTGCT GAATGTAACG CCTTACTATG TGCCAAAGAT CTATCCGGCT
ATTTATGTAC CTGGTGGTTA TCAGGGATGG TCATTTGATA ACGACGGTCT TGGTGCACTC
GCATCAGTAA ACAATGACAA GAAATACGAA GGCTACCTGA ACTTCCCGGA TGCCAATACA
GAGTTTAAAA TCACGCCTGC AAAAAGCTGG GACCTGAACT ACGGTGATGC CGGCGGCGGT
TCCCTTGTGA GCAACGGTGG TAATATCAAG GCGGCTGAAG CAGGTTATTA CCGGCTTACA
GTTGACCTGA ATGCACTCAG TTTTACTATC AGCCGTACTA CCTGGAGTGT GACCGGTAGC
GCTGCAGGTG GCGCGGATAA GGCAATGACC TTTAACGCCG CAACCAAGAA ATGGAGCGTT
ACCACTCCGC TTGCTGCCGG TAGCTTCTAC TTCAGAGCAA ATAATGCCAA CACCATCAGT
CTGAGTGATG ACGATAATAA CGGGGTGCTG AATGCCGGTG CTGCTGGTGT GATCAACATC
ACTACTCCCG GAACTTATAC CATTACCATG GATCTGAGCA ATCCAGGCAA CTACGTTTAC
ACATTGAGCG TACAATAA
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| Protein sequence | MNAWLNKIIA GSLCVLALAS CEKQDSFTQV KTGTTPAFSA TATEFVFSAD KASENAVTYT
WTASQDWGYR AVVNYTLEVA EKGNGFRNAS EIFSANNGLT KTFTVAQLNQ AINNMGLAAG
REHQLVIRVK AAVDTIGDKV YSDSVLLNVT PYYVPKIYPA IYVPGGYQGW SFDNDGLGAL
ASVNNDKKYE GYLNFPDANT EFKITPAKSW DLNYGDAGGG SLVSNGGNIK AAEAGYYRLT
VDLNALSFTI SRTTWSVTGS AAGGADKAMT FNAATKKWSV TTPLAAGSFY FRANNANTIS
LSDDDNNGVL NAGAAGVINI TTPGTYTITM DLSNPGNYVY TLSVQ
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