Gene Cpin_6168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6168 
Symbol 
ID8362350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7782862 
End bp7783920 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID644968298 
Producthypothetical protein 
Protein accessionYP_003125777 
Protein GI256425124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00614919 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAA TCTTTGCTTA TCTCTTACTC ACCCTCCTTT TTACTGCCTG TAAAAAGGAC 
GAAATAAAAT CAGTGTACAC GCTTCCGGCA GGCACACCTT CATTCACCAG CACCATTACA
TCTGTCGTAC TGGATAGTAC ACACCGTGAC GATATAGCGG TTCACTTCGC ATGGTCCGCA
CTTAGTTACG GCATCCGTGC TGACGTCACT TATTCGCTTG AATTTGACAC CAGCAACTCC
ATGAGCCATG CGGTTACATT TGTAATGAAT GCAGATACCG CTAAACATTA CACTGTCGCA
GAACTGAATG CCATCGCATT ACAAACAGGA CTGGAAGGTA ATAGGGCTGC GCCGCTCTAT
GTACGCATGA AAGGGGAAGT CCGTCAGAAT GGTACGGCTA CCAATCCATC CACGATTCCG
GTTACTTACT CCGCTATTCT GGCCATCACC GTCACCGCTT ATGCACCGGG TAATGTAGCC
CTCCTGTGGG TACCCGGAGA ATACCAGGGC TGGAATGCAG CCACCGCTCC TACCATCGCA
GATGCAGGCG GTAAAGGAGC TTATGAAGGC TATATCTATT TCCCGGACAA TGCCAGTGGC
AATTACACCT TCAAGATCAC AACGTCGCCC AACTGGAACG ATCCGGCATG GGGTTATGAA
AGCACAACCA AGATGGTAAA AGGTGGTGGT AATCTCTACA CCCCTGGCAA AGGTTATTTC
CTGGTAAAAG CCAATGTCAA TTCCAGGGAC TGGAGCACAA CACTTACTAC CTGGTCGCTC
GTAGGAGATG CAGTTGCCAG TGACTGGGAA ACAGATATTC CCATGACATT CGACGCTGCC
TCCGGCACAT GGATCGCCAA CTCAGTAGCG ATCAAAGGCG CCGGTGGATT CAAGTTCAGG
GCCAATAAAG GTTGGACGCT CAACTACGGT CCGACCGACG GTAAACTGGT ACAGGATGGT
GGTAATATCT CTGCACCCGG CGGTGTGGCA GGCAATTACA AAGTAGTCCT GAACCTGAGT
CAGGCGGGCA ACTACACCTA TACGCTCACG AAGTTATAA
 
Protein sequence
MKRIFAYLLL TLLFTACKKD EIKSVYTLPA GTPSFTSTIT SVVLDSTHRD DIAVHFAWSA 
LSYGIRADVT YSLEFDTSNS MSHAVTFVMN ADTAKHYTVA ELNAIALQTG LEGNRAAPLY
VRMKGEVRQN GTATNPSTIP VTYSAILAIT VTAYAPGNVA LLWVPGEYQG WNAATAPTIA
DAGGKGAYEG YIYFPDNASG NYTFKITTSP NWNDPAWGYE STTKMVKGGG NLYTPGKGYF
LVKANVNSRD WSTTLTTWSL VGDAVASDWE TDIPMTFDAA SGTWIANSVA IKGAGGFKFR
ANKGWTLNYG PTDGKLVQDG GNISAPGGVA GNYKVVLNLS QAGNYTYTLT KL