7 homologs were found in PanDaTox collection
for query gene Coch_0200 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_0200  ATP/GTP-binding site  100 
 
 
564 aa  1172    Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0480  Glycosyl hydrolase family 98 putative carbohydrate binding module  39.89 
 
 
794 aa  388  1e-106  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.133222 
 
 
-
 
NC_013037  Dfer_1842  hypothetical protein  31.73 
 
 
612 aa  287  4e-76  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3656  hypothetical protein  32.33 
 
 
608 aa  235  2.0000000000000002e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0159137  normal  0.0559089 
 
 
-
 
NC_010506  Swoo_1248  hypothetical protein  28.75 
 
 
610 aa  224  2e-57  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.00000368006  unclonable  0.0000000216996 
 
 
-
 
NC_013132  Cpin_4392  Alpha-galactosidase  27.27 
 
 
589 aa  214  1.9999999999999998e-54  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.941976  normal  0.0174119 
 
 
-
 
NC_010655  Amuc_1463  hypothetical protein  28.97 
 
 
596 aa  204  4e-51  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
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