| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0200 |
|---|
| Symbol | |
|---|
| ID | 8366605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 248462 |
|---|
| End bp | 250156 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644982620 |
|---|
| Product | ATP/GTP-binding site |
|---|
| Protein accession | YP_003140324 |
|---|
| Protein GI | 256819045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC TTTCCATTGC CCTATGCACC GCATTGCTAT GCTTGGCATC GTGCAAAACA
GCCGTTACTA CCTCTGCTAC ACCCGCTCAA ATGGAAGTAA GTAGCCATAA ACATATCGTC
CTTAACAAGG ATACCTATCA TTTTTATCTC AACCAAACTA CCGATAAAGA ACTCTACATC
TCCAACCACG ACCAAACCAA TCCCAAAAAA GTAGGACTTT ATCTCGAAAA CTTAAACGAT
GTAGTGATTG ACGGCAGTAA CAGCGAATGG CTCTTTCACG GCACTATCTT GCCTATCGTA
GTGAAAAACT GTACCAATAT CACTCTTAAA AACTTTTCGA TAGACTTTGC AACCCCTCAT
TTGCGTCAGT TGCACATTAC CGAAGTAGAT GCAAAAAATA ACACGGTAAA AGCCCAACTA
TACCCCGAAG GAAACTATAA AATCAAGGAC GGGAAACTCT TCTTCACTGG CGAAGATTAT
GAAGAAACTC CCTTTGGAGG TATGATATTC AGAGCTGACA AACGTTTGGC TTATAAGCGA
GCTGACGTAA ATTTTAACCC TACTAAAATT ACCGAAATAG CTCCTAATGA GTTCCGCATC
GAAGGCATAG GTGCTAAACC TTATTTGGAA AAAGGAGAGC GTTTTGTATT GCGCACCTAC
ACACGTCCTA CACCTGCCAT TTTCGTTACT GAAAGCAAGA ACGTAAAGTT AGAAAATATA
ACTGTGCATA ACACCCAAGG TATGGGACTC TTAGCGCAAC TCACCGAAAA TATAACCCTC
AACCGCTTTC GCGTAGCTTT AAAAGAAGGC ACCGAACGCT ATTTCACTAC CCAAGCCGAT
GCAACTCACT TTTCTGCTTG CAAAGGACTC ATACGCTCTG AAAACGGACT CTATGAAGGT
ATGGCTGATG ATGCTATTAA CGTACACGGC ACTTACCTAA AAGTAATAGC TCGTGAAGAC
AATCACACTA TCAAAGCGCA GTATATGCAC CCCCAATCGT GGGGATTCCT CTGGGGCAAT
GTAGGTGATA AAGTGCAGTT CATTGCCTCC AAGACAATGG ACGTTATCGG TGATAAAACC
TATCGCATTC AAGCTATTAA AGCCGTTGAT AAACCTACCG AAGTAGGTGC TAAGATATTT
AAAATCACTT TTGATGAAAT ACTACCTACC GAAGTAAATC CCGATACACC TTGTGGGGTA
GAAAACCTTA CTTGGACACC TGAGGTGATT TTCAAAAACA ATATAGTGCG TAACAATCGG
GCTCGTGGGG CACTGTTTAG CACTCCTAAA AAGGTCGTCT GTGCCAATAA CACCTTCGAC
CATACTCACG GCACTGCTAT CTTACTCTGT GGCGATTGTA ATGGCTGGTA TGAAACAGGT
GCTTGCCACA ATGTTATCAT CAAAAACAAC CACTTCATCA ATGCACTTAC CGCTAATTAT
CAATTTACGA ACGCTATCAT TTCCATCTAT CCCGAAATCC CCAACTTAGA AGCACAACAA
AAGTATTTCC ATTCTAATAT TACTATTGAA AACAATGTGT TTGAAACTTT TGATGAGCCT
ATTCTCTATG CCAAATCAGT AGAGAATCTC ATTTACCGCA ATAATAAAAT TATCAAAAAT
CAAGAGTTCA AACCTTTTCA TTGGAATAAA GAACGTTTTA AGTTAGAACG CACTAAGAAT
GTAAAGATTG ATTAA
|
|---|
| Protein sequence | MKTLSIALCT ALLCLASCKT AVTTSATPAQ MEVSSHKHIV LNKDTYHFYL NQTTDKELYI
SNHDQTNPKK VGLYLENLND VVIDGSNSEW LFHGTILPIV VKNCTNITLK NFSIDFATPH
LRQLHITEVD AKNNTVKAQL YPEGNYKIKD GKLFFTGEDY EETPFGGMIF RADKRLAYKR
ADVNFNPTKI TEIAPNEFRI EGIGAKPYLE KGERFVLRTY TRPTPAIFVT ESKNVKLENI
TVHNTQGMGL LAQLTENITL NRFRVALKEG TERYFTTQAD ATHFSACKGL IRSENGLYEG
MADDAINVHG TYLKVIARED NHTIKAQYMH PQSWGFLWGN VGDKVQFIAS KTMDVIGDKT
YRIQAIKAVD KPTEVGAKIF KITFDEILPT EVNPDTPCGV ENLTWTPEVI FKNNIVRNNR
ARGALFSTPK KVVCANNTFD HTHGTAILLC GDCNGWYETG ACHNVIIKNN HFINALTANY
QFTNAIISIY PEIPNLEAQQ KYFHSNITIE NNVFETFDEP ILYAKSVENL IYRNNKIIKN
QEFKPFHWNK ERFKLERTKN VKID
|
|---|
| |