9 homologs were found in PanDaTox collection
for query gene CPS_3437 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_3437  hypothetical protein  100 
 
 
267 aa  553  1e-157  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2402  hypothetical protein  77.99 
 
 
260 aa  431  1e-120  Psychromonas ingrahamii 37  Bacteria  normal  0.421623  normal  0.481687 
 
 
-
 
NC_011313  VSAL_II0627  hypothetical protein  73.31 
 
 
287 aa  412  1e-114  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.012807  n/a   
 
 
-
 
NC_003910  CPS_0690  hypothetical protein  50.25 
 
 
205 aa  218  1e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_27160  Phytanoyl-CoA dioxygenase  41.44 
 
 
271 aa  186  3e-46  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0110  Phytanoyl-CoA dioxygenase  37.07 
 
 
260 aa  158  1e-37  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.806567 
 
 
-
 
NC_011726  PCC8801_0114  hypothetical protein  36.24 
 
 
260 aa  150  2e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009045  PICST_47506  predicted protein  23.56 
 
 
293 aa  55.1  0.000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.0187583  normal  0.27558 
 
 
-
 
NC_013061  Phep_1704  Phytanoyl-CoA dioxygenase  22.22 
 
 
259 aa  43.5  0.004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.235452  hitchhiker  0.00714566 
 
 
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