Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0627 |
Symbol | |
ID | 6962017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 679323 |
End bp | 680186 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643381912 |
Product | hypothetical protein |
Protein accession | YP_002264950 |
Protein GI | 209809412 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.012807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGATA ATCAAAGTCA GTTACAAAGT AGCTATGAAG AGCAAGGTTA TTTTGTCATT AGAAATTATT TTACGGCATC TGAAATGTCA TCTCTTAGAG ACGTTATATT AAAATTTCAT GAGTTATGGA AAGAAGACAA CGCAGAATTT TATCAAGAAG AAGCATTCAA TTCGTCTTTA ATTACTGGCA GCCAATACTT AGAATTCAAC GATAGGGTAA AACTGTTTAA TTTTATTAGC TCAAAGAAAA TAATGAGTGC AGTCGATGTG GTTATCCCCA CAAATCCTGT TTTTATGAAT ACTCAATTGT TCTTTAATCC AGTAAACCCT CAGCAAAAAG ATTTTTGGCA TCGTGACTGT CAGTATGATC ATGATGTAGA AGTACAAAAA AAAGTAATTC ACGATACACA AGTCGTACAT CTTCGAATTC CTTTGTTTGA TGAACTCGGT ATGGAGATTA TCCCAGGAAC ACATAAACGT TGGGACAATG CTGAAGAGTT TGATATCCGA CAAGAAGAAA ATGGACACGA AAGCCATGAG GATATATCGG GAGGAAAAAA GATTGGACTT GCAGCCGGTG ATTTATTGGT TTTTTCCGCG GATATGATAC ATCGTGGTTT GTATGGATTA GATCGCTTAG CTTTGGATAT TTTAACTTTC GATTCAGCGG TTGACTATAT TGATGATGAT TGTTTACCGG ATACTTTAAT ACTGAGTAAC ATTAATGATC CAAGGTTATT TCTAAATGCA ATAGAGTTAA AATCAAAATA CTCATTGTCT GAAAACGATG ATAGCTTTAG AGACCCTAAT ACAATGGATG ATGATAACGG CATAATGAAG TCCAAATTAT GTACCGCAGG TTAA
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Protein sequence | MVDNQSQLQS SYEEQGYFVI RNYFTASEMS SLRDVILKFH ELWKEDNAEF YQEEAFNSSL ITGSQYLEFN DRVKLFNFIS SKKIMSAVDV VIPTNPVFMN TQLFFNPVNP QQKDFWHRDC QYDHDVEVQK KVIHDTQVVH LRIPLFDELG MEIIPGTHKR WDNAEEFDIR QEENGHESHE DISGGKKIGL AAGDLLVFSA DMIHRGLYGL DRLALDILTF DSAVDYIDDD CLPDTLILSN INDPRLFLNA IELKSKYSLS ENDDSFRDPN TMDDDNGIMK SKLCTAG
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