Gene VSAL_II0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0627 
Symbol 
ID6962017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp679323 
End bp680186 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content35% 
IMG OID643381912 
Producthypothetical protein 
Protein accessionYP_002264950 
Protein GI209809412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.012807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGATA ATCAAAGTCA GTTACAAAGT AGCTATGAAG AGCAAGGTTA TTTTGTCATT 
AGAAATTATT TTACGGCATC TGAAATGTCA TCTCTTAGAG ACGTTATATT AAAATTTCAT
GAGTTATGGA AAGAAGACAA CGCAGAATTT TATCAAGAAG AAGCATTCAA TTCGTCTTTA
ATTACTGGCA GCCAATACTT AGAATTCAAC GATAGGGTAA AACTGTTTAA TTTTATTAGC
TCAAAGAAAA TAATGAGTGC AGTCGATGTG GTTATCCCCA CAAATCCTGT TTTTATGAAT
ACTCAATTGT TCTTTAATCC AGTAAACCCT CAGCAAAAAG ATTTTTGGCA TCGTGACTGT
CAGTATGATC ATGATGTAGA AGTACAAAAA AAAGTAATTC ACGATACACA AGTCGTACAT
CTTCGAATTC CTTTGTTTGA TGAACTCGGT ATGGAGATTA TCCCAGGAAC ACATAAACGT
TGGGACAATG CTGAAGAGTT TGATATCCGA CAAGAAGAAA ATGGACACGA AAGCCATGAG
GATATATCGG GAGGAAAAAA GATTGGACTT GCAGCCGGTG ATTTATTGGT TTTTTCCGCG
GATATGATAC ATCGTGGTTT GTATGGATTA GATCGCTTAG CTTTGGATAT TTTAACTTTC
GATTCAGCGG TTGACTATAT TGATGATGAT TGTTTACCGG ATACTTTAAT ACTGAGTAAC
ATTAATGATC CAAGGTTATT TCTAAATGCA ATAGAGTTAA AATCAAAATA CTCATTGTCT
GAAAACGATG ATAGCTTTAG AGACCCTAAT ACAATGGATG ATGATAACGG CATAATGAAG
TCCAAATTAT GTACCGCAGG TTAA
 
Protein sequence
MVDNQSQLQS SYEEQGYFVI RNYFTASEMS SLRDVILKFH ELWKEDNAEF YQEEAFNSSL 
ITGSQYLEFN DRVKLFNFIS SKKIMSAVDV VIPTNPVFMN TQLFFNPVNP QQKDFWHRDC
QYDHDVEVQK KVIHDTQVVH LRIPLFDELG MEIIPGTHKR WDNAEEFDIR QEENGHESHE
DISGGKKIGL AAGDLLVFSA DMIHRGLYGL DRLALDILTF DSAVDYIDDD CLPDTLILSN
INDPRLFLNA IELKSKYSLS ENDDSFRDPN TMDDDNGIMK SKLCTAG