Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_47506 |
Symbol | |
ID | 4839108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 805891 |
End bp | 806772 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390423 |
Product | predicted protein |
Protein accession | XP_001384817 |
Protein GI | 150865552 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0187583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.27558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAGCG CTTTGCCCCA CAAATACCAC GACGAAATCG AAGCCCAAGG CTTCACAGTG ATCCGAGAAT TCCTTACCCC GGACGAGATT GCCAAATATA GAGCTGCGGC TGAAGTTGTA ATCCAATATG CCCGTGAAGG CAACTATCCC TATGTTAGAA CAAGAGGCAA ACAGTTTCCG CCATGGCCAA AGAATTTCAG TCCCGACATC TGGGGAGTCA GTGGTCTCTT GCACCCAGAC TTGGGTGAAA AATCTACTCC CTTTCACGAA TGCTATGCCA GTGAAAAGAT GTTGGCTGTC GTTGGTGACA TTTTGCAAGT TGGCAAAGAG GGTTTGTCTA TGGAGTTATT CAACATGTTG ATCAACCCCT TAACAGACTT CGGGTTGGAC TGGCACAGAG ACACGATCAA ACCGGAAGCC TCTGAACAGG AAGAAGCTCA GCAGTTGCTA GAGGAACCTT ATGCTGGAAC GCAGTTCAAT TTGGCTCTCA CTGACGATAA GTGTCTTATC GTTATTCCAG GATCTCACAA GCGAGTCAGA ACTTCGGAAG AAAGAGAAAA GACTCTGAAT GATAACAAAA AGGAATTCAT AACCAATCAA TTGATTGTAG AATTGAACCC GGGTGATCTT GTATTCTACA ATAACAATAT TCTTCACCGA GCCGAATATT CTTGCAAGAG TACCAGAGTG ACTTTGCACG GATCATATGG CCATGTTGAC CATGGCAGAT CTAGGGCAAA GGGGATCTTG CAACATGGTG TTGCTGAATG GTTGCCTCGC TTCGAACCCA AAGAAGGAAA CATGGCGATG TTAAAAGAAA AGTTGGTTAA ACTTGCAAAG GAGTTTGAAT CTGTTGATCT CGGATATGCT CTTGAAGGGT AG
|
Protein sequence | MPSALPHKYH DEIEAQGFTV IREFLTPDEI AKYRAAAEVV IQYAREGNYP YVRTRGKQFP PWPKNFSPDI WGVSGLLHPD LGEKSTPFHE CYASEKMLAV VGDILQVGKE GLSMELFNML INPLTDFGLD WHRDTIKPEA SEQEEAQQLL EEPYAGTQFN LALTDDKCLI VIPGSHKRVR TSEEREKTSN DNKKEFITNQ LIVELNPGDL VFYNNNILHR AEYSCKSTRV TLHGSYGHVD HGRSRAKGIL QHGVAEWLPR FEPKEGNMAM LKEKLVKLAK EFESVDLGYA LEG
|
| |