11 homologs were found in PanDaTox collection
for query gene CPS_1342 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_1342  hypothetical protein  100 
 
 
306 aa  617  1e-176  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1536  hypothetical protein  30 
 
 
298 aa  56.6  0.0000005  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1603  hypothetical protein  30 
 
 
298 aa  56.2  0.0000006  Shewanella sp. MR-7  Bacteria  normal  0.401351  normal  0.378542 
 
 
-
 
NC_008577  Shewana3_1597  hypothetical protein  30 
 
 
298 aa  56.6  0.0000006  Shewanella sp. ANA-3  Bacteria  normal  0.863042  normal 
 
 
-
 
NC_009052  Sbal_1829  hypothetical protein  28 
 
 
298 aa  51.6  0.00002  Shewanella baltica OS155  Bacteria  normal  0.998147  n/a   
 
 
-
 
NC_009438  Sputcn32_1628  hypothetical protein  28 
 
 
298 aa  51.6  0.00002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1816  hypothetical protein  28 
 
 
298 aa  51.6  0.00002  Shewanella baltica OS185  Bacteria  normal  0.414931  n/a   
 
 
-
 
NC_009997  Sbal195_1865  hypothetical protein  28 
 
 
298 aa  51.6  0.00002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2460  hypothetical protein  28 
 
 
298 aa  51.6  0.00002  Shewanella baltica OS223  Bacteria  normal  0.0123509  normal 
 
 
-
 
NC_007954  Sden_3041  hypothetical protein  29.41 
 
 
296 aa  50.4  0.00003  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0753  hypothetical protein  29.57 
 
 
297 aa  47.8  0.0002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
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