Gene CPS_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1342 
Symbol 
ID3518729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1378698 
End bp1379618 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content33% 
IMG OID637283806 
Producthypothetical protein 
Protein accessionYP_268085 
Protein GI71278668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG CAGAGTTAAG AAACCATCCG TTTCTACTTT TGGTCTTAAA AGACGGGGAA 
AGCGAAGGCT ATTTTTCTCC GGAGTTAGTG CATAAAATCA AACAACAACT AGTTGATATG
TCTTTGAGGA TAGCCTCTGA TAATTTATCT ATTATCTATG CAGATCAAAT TAATAAAGGC
TGTGAAATTG TTCTGGGCAT CACCAATTTA GGTTTATTAG ATCTTTGTGA TAAAGATGAA
GTTAAAGCAA AAGAGATTAT AAAAACTCAA GGTATTGTTT ATTGCTTTAG AGCGGGTTGG
GCTAAATATG CGCAATTGAA GAAAATATCT CCTTCATACT TTGAAAGCAT TTCAATCACC
AGCTATGGTA TAGCAATTAA TGACACCTCT GATATTAGAG TAATGCATGA TAGTTTACTC
AAAGAAGGTT ATAAAAGTGC GAAGCTATTA GATGTTTATA AAAACATTGC AGCCAGCTAT
TGTGCCAGTT CCATCCTAGT TGATAACGAT GAAGATATAT TGTTGTTTGA GTTGCAACGA
TTTCTTAATA CTGCGATTGC TTTATTAATG ATCGACTCTG ATAAAAAAGT GTTTACCAGT
TCGTTATATC AAACATTCAA TACTTTCCTT GCTAGCACCA GTAAAGATGA CTTACTTGAA
AAGTTAGAAC TTTGTATCTT AAAGCTAACA GGCCAGTTGT CGATACTGAC TAAGAGTTAC
TTACAAGAAA TAGATTTATT AAATTTCTAT GAGTTTAAAG GCATCATTAA TCAACAAATT
GATGTTGCCA TTCATATTCA AGAAATATTA GAACTTCCAA TTACTGTTGC GAATGAATTA
CATGGTGATT TTGAGGGTGG TTATGATTTT CATGCAGACG ATGAAGATGA CCTCGCTTAT
TTAATGCCAG ACGATAGGTA A
 
Protein sequence
MRIAELRNHP FLLLVLKDGE SEGYFSPELV HKIKQQLVDM SLRIASDNLS IIYADQINKG 
CEIVLGITNL GLLDLCDKDE VKAKEIIKTQ GIVYCFRAGW AKYAQLKKIS PSYFESISIT
SYGIAINDTS DIRVMHDSLL KEGYKSAKLL DVYKNIAASY CASSILVDND EDILLFELQR
FLNTAIALLM IDSDKKVFTS SLYQTFNTFL ASTSKDDLLE KLELCILKLT GQLSILTKSY
LQEIDLLNFY EFKGIINQQI DVAIHIQEIL ELPITVANEL HGDFEGGYDF HADDEDDLAY
LMPDDR