Gene Shewmr4_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1536 
Symbol 
ID4252114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1812739 
End bp1813635 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID638118140 
Producthypothetical protein 
Protein accessionYP_733671 
Protein GI113969878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGG TACTGCGTGA TTTAGACCAA GGCCCATACC TGAGCAAGGT GTTGGCCAAA 
GGCCAAGCAG ACGACACCCT TAGCGGTGAG CAGCTCGCAC AAATCAAATC TAAAGCCATT
TTGATGAGCC TCAAATTGGC GGATAAGTTC TACAACAAGT ACAAGATGCA CTTACTGGAA
CAGGCGGCGC ACGATGTGAT TGGCGTTGTC AGCCTCGGAT TAATGGAACT GTCTGATCAG
GATCAACAGC AAGCGGTGCG TTTATTGCTC ACCAGCGACG GCGTAGTCAA ATGCTTCCAA
AAGGGTTGGA GCATGCTCAG CGTCGTCAGC AAACATAAGC TGGCGAATGG TAAGTCGCTC
TATGGTGATG TGGACAAATT CCTGCTGGAA CAAGTCTCTA CGCCGCCTGA TGCCGAAGAG
TGGCTGGGCT ATGAGGCCTA CCAGGATGCC TTGGCCGAGC ACCAACGTCA GCAATCGATT
GCGGCACTCA TGGCGCAGTT TTATGCCCAA ACCAGCTATG ATCCTTTGGA TTTCTTAAAT
CTGGAGAGCG TATTGGCCGA AGCCGTGCTG TATCGGATGT TGTTTGATAA TGCCAAAGTC
AGACAAGATC TGAAAAAGCG CATTGCCAAA ATCAGCTTGC AGGACGAATG GTTTAGCCTT
GAGTATATCG AGCAGCAAAC CCAAAAAGCC TTGGCGGAAC TCCCTGCGGA GCTGGCCGAG
ACTATCGGTA AAGATTTGGG CAAAAACTTT GCGCCAGCAT TGCTGCGTAC ATTGAATTTC
GCGAAAAGCT ACCGCGAACT GCAGCTTAGC GATGCCTCAC CTGAGCGTTT AGAAAGATTC
GAGCATAAAG AAGGACTCGT CGGTCTACTC GGCTGGCCGC TTTATATAGT GCTTTAA
 
Protein sequence
MQLVLRDLDQ GPYLSKVLAK GQADDTLSGE QLAQIKSKAI LMSLKLADKF YNKYKMHLLE 
QAAHDVIGVV SLGLMELSDQ DQQQAVRLLL TSDGVVKCFQ KGWSMLSVVS KHKLANGKSL
YGDVDKFLLE QVSTPPDAEE WLGYEAYQDA LAEHQRQQSI AALMAQFYAQ TSYDPLDFLN
LESVLAEAVL YRMLFDNAKV RQDLKKRIAK ISLQDEWFSL EYIEQQTQKA LAELPAELAE
TIGKDLGKNF APALLRTLNF AKSYRELQLS DASPERLERF EHKEGLVGLL GWPLYIVL