6 homologs were found in PanDaTox collection
for query gene BBta_6142 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6142  hypothetical protein  100 
 
 
138 aa  276  5e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.394884  normal  0.0609846 
 
 
-
 
NC_009720  Xaut_1991  hypothetical protein  37.82 
 
 
144 aa  85.1  3e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.39715  normal 
 
 
-
 
NC_012858  Rleg_6950  hypothetical protein  36.67 
 
 
198 aa  78.6  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5113  putative cysteine rich repeat domain protein  34.62 
 
 
142 aa  77  0.00000000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2498  cysteine-rich repeat-containing protein  26.27 
 
 
169 aa  50.1  0.00001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3450  hypothetical protein  39.29 
 
 
91 aa  40  0.01  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0951964  normal 
 
 
-
 
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