17 homologs were found in PanDaTox collection
for query gene Avi_3252 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011989  Avi_3252  hypothetical protein  100 
 
 		 146 aa  302  1.0000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_5514  hypothetical protein  46.67 
 
 		 179 aa  121  4e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_7578  hypothetical protein  41.94 
 
 		 172 aa  120  5e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0518025  normal  0.549392 
 
 
-
 
NC_010511  M446_3815  hypothetical protein  45.19 
 
 		 179 aa  119  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2907  hypothetical protein  43.28 
 
 		 179 aa  114  3.9999999999999997e-25  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.912131 
 
 
-
 
NC_011757  Mchl_3133  protein of unknown function UPF0153  40.41 
 
 		 179 aa  114  3.9999999999999997e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.411401 
 
 
-
 
NC_010505  Mrad2831_0849  hypothetical protein  42.97 
 
 		 177 aa  114  5e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0517033  decreased coverage  0.000196139 
 
 
-
 
NC_010725  Mpop_3031  protein of unknown function UPF0153  42.86 
 
 		 179 aa  112  2.0000000000000002e-24  Methylobacterium populi BJ001  Bacteria  normal  0.47474  normal  1 
 
 
-
 
NC_010338  Caul_0365  hypothetical protein  45.05 
 
 		 173 aa  100  4e-21  Caulobacter sp. K31  Bacteria  normal  0.759593  normal  1 
 
 
-
 
NC_010581  Bind_2301  hypothetical protein  39.18 
 
 		 138 aa  85.5  2e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.708032  normal  1 
 
 
-
 
NC_011666  Msil_0897  hypothetical protein  35.35 
 
 		 138 aa  82.8  0.000000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0194546 
 
 
-
 
NC_010510  Mrad2831_6029  hypothetical protein  46.03 
 
 		 131 aa  56.2  0.0000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.178884 
 
 
-
 
NC_002939  GSU2457  hypothetical protein  47.83 
 
 		 75 aa  47.4  0.00007  Geobacter sulfurreducens PCA  Bacteria  normal  0.574225  n/a   
 
 
-
 
NC_014212  Mesil_0219  protein of unknown function UPF0153  35.82 
 
 		 114 aa  45.4  0.0002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.162124 
 
 
-
 
NC_009483  Gura_0636  hypothetical protein  40 
 
 		 77 aa  46.2  0.0002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0207413  n/a   
 
 
-
 
NC_012918  GM21_0592  protein of unknown function UPF0153  43.48 
 
 		 76 aa  44.3  0.0006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00030944 
 
 
-
 
NC_011146  Gbem_0579  protein of unknown function UPF0153  43.48 
 
 		 76 aa  43.1  0.001  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000485137  n/a   
 
 
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