11 homologs were found in PanDaTox collection
for query gene YpsIP31758_A0029 on replicon NC_009704
Organism: Yersinia pseudotuberculosis IP 31758



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009704  YpsIP31758_A0029  conjugal transfer protein TraK  100 
 
 		 125 aa  256  5.0000000000000005e-68  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  7.086299999999999e-21  n/a   
 
 
-
 
NC_010579  XfasM23_2251  hypothetical protein  48.42 
 
 		 131 aa  85.1  3e-16  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp0067  hypothetical protein  37.4 
 
 		 121 aa  70.1  0.000000000009  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0071  hypothetical protein  47.69 
 
 		 121 aa  62.4  0.000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008782  Ajs_2540  putative OriT-binding protein, TraK  41.67 
 
 		 92 aa  51.6  0.000004  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00967752  hitchhiker  0.000154647 
 
 
-
 
NC_008463  PA14_15500  oriT-binding protein, TraK  34.62 
 
 		 95 aa  51.2  0.000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000000121706  unclonable  4.28855e-22 
 
 
-
 
NC_007484  Noc_3066  hypothetical protein  36.84 
 
 		 148 aa  49.7  0.00001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0807  hypothetical protein  28.68 
 
 		 121 aa  49.7  0.00001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000443532 
 
 
-
 
NC_007337  Reut_D6528  TraK protein of DNA transfer system  36.17 
 
 		 132 aa  44.3  0.0005  Ralstonia eutropha JMP134  Bacteria  normal  0.374342  n/a   
 
 
-
 
NC_008385  Bamb_6609  TraK protein of DNA transfer system  36.17 
 
 		 132 aa  44.3  0.0005  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008766  Ajs_4312  TraK protein of DNA transfer system  31.91 
 
 		 139 aa  42  0.003  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
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