Gene Ajs_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2540 
Symbol 
ID4672240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2705121 
End bp2705399 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content62% 
IMG OID639839605 
Productputative OriT-binding protein, TraK 
Protein accessionYP_986774 
Protein GI121594878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00967752 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000154647 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACGA CAGAAAGCAG CTACCCCGAG GAGCTGGCCG CACGGCTGGC TCTTCAGCAG 
AAGACCTCGC AAACAAAGCG CAGGGACTAC CTGGCCGCTT TCATGGCGGT GCGCTCGGAC
GTGAAGGAAG CGATGGAGGC CGGCTACGCG CTCAAGATCA TCTGGGAGCA CCTGCGCGAG
GTCGGGCGCA TCCCTTTCCG GTATGAGACG TTCCTGAAGT ACGTTCGCCA GCACATCACC
AATGCGCGGC CTGGCTCCAT GGGGCAGGGT ACGAAGTAA
 
Protein sequence
MATTESSYPE ELAARLALQQ KTSQTKRRDY LAAFMAVRSD VKEAMEAGYA LKIIWEHLRE 
VGRIPFRYET FLKYVRQHIT NARPGSMGQG TK