| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0029 |
|---|
| Symbol | |
|---|
| ID | 5384096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009704 |
|---|
| Strand | + |
|---|
| Start bp | 50746 |
|---|
| End bp | 51123 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640857101 |
|---|
| Product | conjugal transfer protein TraK |
|---|
| Protein accession | YP_001393290 |
|---|
| Protein GI | 153930578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 7.086299999999999e-21 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA GCCTTTCACA GCGTATAGCT GAGCGGCAAA AGCTTCTTTC ACCCCTAGGT
AGGGGGGGAG CTAATAGGGC TGAGTTTCTA GCACAAAGAG AGGACATTGC TGATGCATTA
CAGGATGGGT GGTCTATCAA GCAAATATGG GACACGCTTT ATGACGAGGG AAAAATTACC
TTTAGCTATG ACCCTTTTAC CAAATACGTA AAAAATATCA TCCGATCAAA CAAACAACTC
CCCGTCTTAT CAGGAGTGCA GCAAGGGCAA ATACCAGAGC AAAAACCTAA AGATGCTCAA
TCTCAAACAC CAAAATCAAT TTTCAGCACT GGCTTACCAA AGTTTCAACA TAATCCAGGC
GCGGACAACG ACAACTAG
|
|---|
| Protein sequence | MAKSLSQRIA ERQKLLSPLG RGGANRAEFL AQREDIADAL QDGWSIKQIW DTLYDEGKIT
FSYDPFTKYV KNIIRSNKQL PVLSGVQQGQ IPEQKPKDAQ SQTPKSIFST GLPKFQHNPG
ADNDN
|
|---|
| |