11 homologs were found in PanDaTox collection
for query gene Ajs_4312 on replicon NC_008766
Organism: Acidovorax sp. JS42



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008766  Ajs_4312  TraK protein of DNA transfer system  100 
 
 		 139 aa  280  4.0000000000000003e-75  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007337  Reut_D6528  TraK protein of DNA transfer system  54.68 
 
 		 132 aa  127  4.0000000000000003e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.374342  n/a   
 
 
-
 
NC_008385  Bamb_6609  TraK protein of DNA transfer system  54.68 
 
 		 132 aa  127  4.0000000000000003e-29  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_2540  putative OriT-binding protein, TraK  50.63 
 
 		 92 aa  79.3  0.00000000000002  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00967752  hitchhiker  0.000154647 
 
 
-
 
NC_006368  lpp0067  hypothetical protein  31.53 
 
 		 121 aa  65.5  0.0000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_15500  oriT-binding protein, TraK  48.48 
 
 		 95 aa  62.4  0.000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000000121706  unclonable  4.28855e-22 
 
 
-
 
NC_010579  XfasM23_2251  hypothetical protein  30.3 
 
 		 131 aa  62.4  0.000000002  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_006369  lpl0071  hypothetical protein  32.84 
 
 		 121 aa  55.8  0.0000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010000  Sbal195_4673  hypothetical protein  27.54 
 
 		 117 aa  51.6  0.000003  Shewanella baltica OS195  Bacteria  n/a    n/a   
 
 
-
 
NC_009704  YpsIP31758_A0029  conjugal transfer protein TraK  25.23 
 
 		 125 aa  46.6  0.0001  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  7.086299999999999e-21  n/a   
 
 
-
 
NC_007484  Noc_3066  hypothetical protein  32.31 
 
 		 148 aa  42  0.003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>